Evidence map›Paper›PMID 38888692›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2024

Drug to genome to drug: a computational large-scale chemogenomics screening for novel drug candidates against sporotrichosis.

Andressa Santana Santos, Vinícius Alexandre Fiaia Costa, Vivianny Aparecida Queiroz Freitas, Laura Raniere Borges Dos Anjos, Eder Soares de Almeida Santos, Thales Domingos Arantes, Carolina Rodrigues Costa, Ana Laura de Sene Amâncio Zara, Maria do Rosário Rodrigues Silva, Bruno Junior Neves

Erratum issuedAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Andressa Santana Santos *Institute of Tropical Pathology and Public Health, Federal University of Goiás, Goiânia, Goiás, Brazil.
Vinícius Alexandre Fiaia Costa *Laboratory of Cheminformatics, Faculty of Pharmacy, Federal University of Goiás, Goiânia, Goiás, Brazil.
Vivianny Aparecida Queiroz FreitasInstitute of Tropical Pathology and Public Health, Federal University of Goiás, Goiânia, Goiás, Brazil.
Laura Raniere Borges Dos AnjosInstitute of Tropical Pathology and Public Health, Federal University of Goiás, Goiânia, Goiás, Brazil.
Eder Soares de Almeida SantosLaboratory of Cheminformatics, Faculty of Pharmacy, Federal University of Goiás, Goiânia, Goiás, Brazil.
Thales Domingos ArantesInstitute of Tropical Pathology and Public Health, Federal University of Goiás, Goiânia, Goiás, Brazil.
Carolina Rodrigues CostaInstitute of Tropical Pathology and Public Health, Federal University of Goiás, Goiânia, Goiás, Brazil.
Ana Laura de Sene Amâncio ZaraPostgraduate Program in Health Technology Assistance and Assessment (PPG-AAS), Faculty of Pharmacy, Federal University of Goiás, Goiânia, Goiás, Brazil.
Maria do Rosário Rodrigues SilvaInstitute of Tropical Pathology and Public Health, Federal University of Goiás, Goiânia, Goiás, Brazil.
Bruno Junior NevesLaboratory of Cheminformatics, Faculty of Pharmacy, Federal University of Goiás, Goiânia, Goiás, Brazil. brunoneves@ufg.br.ORCID http://orcid.org/0000-0002-1309-8743

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 311100/2023-6FAPEG 202310267001412
6 · The paper itself

Abstract

Sporotrichosis is recognized as the predominant subcutaneous mycosis in South America, attributed to pathogenic species within the Sporothrix genus. Notably, in Brazil, Sporothrix brasiliensis emerges as the principal species, exhibiting significant sapronotic, zoonotic and enzootic epidemic potential. Consequently, the discovery of novel therapeutic agents for the treatment of sporotrichosis is imperative. The present study is dedicated to the repositioning of pharmaceuticals for sporotrichosis therapy. To achieve this goal, we designed a pipeline with the following steps: (a) compilation and preparation of Sporothrix genome data; (b) identification of orthologous proteins among the species; (c) identification of homologous proteins in publicly available drug-target databases; (d) selection of Sporothrix essential targets using validated genes from Saccharomyces cerevisiae; (e) molecular modeling studies; and (f) experimental validation of selected candidates. Based on this approach, we were able to prioritize eight drugs for in vitro experimental validation. Among the evaluated compounds, everolimus and bifonazole demonstrated minimum inhibitory concentration (MIC) values of 0.5 µg/mL and 4.0 µg/mL, respectively. Subsequently, molecular docking studies suggest that bifonazole and everolimus may target specific proteins within S. brasiliensis- namely, sterol 14-α-demethylase and serine/threonine-protein kinase TOR, respectively. These findings shed light on the potential binding affinities and binding modes of bifonazole and everolimus with their probable targets, providing a preliminary understanding of the antifungal mechanism of action of these compounds. In conclusion, our research advances the understanding of the therapeutic potential of bifonazole and everolimus, supporting their further investigation as antifungal agents for sporotrichosis in prospective hit-to-lead and preclinical investigations.

Indexed as

Antifungal AgentsDrug RepositioningGenome, FungalMicrobial Sensitivity TestsSporothrixSporotrichosisBrazilComputational BiologyDrug DiscoveryDrug Evaluation, PreclinicalFungal ProteinsGenomicsHumansMolecular Docking SimulationAntifungal AgentsFungal ProteinsDrug repurposingEverolimusSporothrix brasiliensisSporotrichosisStructural bioinformatics

Identifiers

PMID38888692
PMCPMC11405749

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.