Evidence map›Paper›PMID 38888469›Full record

ArticleCancer research2024

Increased Protein Kinase A Activity Induces Fibrolamellar Hepatocellular Carcinoma Features Independent of DNAJB1.

Mahsa Shirani, Solomon Levin, Bassem Shebl, David Requena, Tova M Finkelstein, Daniel S Johnson, Denise Ng, Gadi Lalazar, Søren Heissel, Peter Hojrup and 8 more

Abstract read
In one paragraph

Article in Cancer research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
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  6. FusionCancers · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Mahsa ShiraniLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0009-0008-5171-3808
Solomon LevinLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0003-1548-8881
Bassem SheblLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0009-0004-8128-2536
David RequenaLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-5968-1133
Tova M FinkelsteinLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-9246-9548
Daniel S JohnsonLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0001-8906-0509
Denise NgLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-4203-0780
Gadi LalazarLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0001-7392-3082
Søren HeisselProteomics Resource Center, The Rockefeller University, New York, New York.ORCID 0000-0003-2692-5602
Peter HojrupDepartment of Biochemistry and Molecular Biology. University of Southern Denmark, Odense, Denmark.ORCID 0000-0002-7838-6180
Henrik MolinaProteomics Resource Center, The Rockefeller University, New York, New York.ORCID 0000-0001-8950-4990
Ype P de JongLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, New York.ORCID 0000-0001-6357-2370
Charles M RiceLaboratory of Virology and Infectious Disease, The Rockefeller University, New York, New York.ORCID 0000-0003-3087-8079
Aatur D SinghiDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.ORCID 0000-0003-3930-7096
Michael S TorbensonDivision of Anatomic Pathology, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0002-8334-7725
Philip CoffinoLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0003-0344-5083
Barbara LyonsDepartment of Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico.ORCID 0000-0003-3242-2104
Sanford M SimonLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-8615-4224

Funding

Developing, Demonstrating, and Disseminating Innovative Programs to Achieve Translational SuccessUL1TR001866 · NCATS · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY, KRUEGER, JAMES G · 2016 to 2025
$40.6M
Project 4: ImmunovirotherapyP50CA210964 · NCI · MAYO CLINIC ROCHESTER · PI Rory Smoot · 2018 to 2026
$20.5M
What differences between the chimeric fusion oncoprotein DNAJB1-PRKACA and native kinase PRKACA lead to transformation in the childhood cancer, fibrolamellar hepatocellular carcinoma?U54CA243126 · NCI · ROCKEFELLER UNIVERSITY · PI SIMON, SANFORD M · 2019 to 2023
$5.4M
Cancer Moonshot (Misión contra el Cáncer) P50CA210964NCATS NIH HHS UL1 TR001866NCI NIH HHS P50 CA210964NCI NIH HHS U54 CA243126
6 · The paper itself

Abstract

Fibrolamellar hepatocellular carcinoma (FLC) is a rare liver cancer that is driven by the fusion of DNAJB1 and PRKACA, the catalytic subunit of protein kinase A (PKA). PKA activity is controlled through regulatory proteins that both inhibit catalytic activity and control localization, and an excess of regulatory subunits ensures PRKACA activity is inhibited. Here, we found an increase in the ratio of catalytic to regulatory units in FLC patient tumors driven by DNAJB1::PRKACA using mass spectrometry, biochemistry, and immunofluorescence, with increased nuclear localization of the kinase. Overexpression of DNAJB1::PRKACA, ATP1B1::PRKACA, or PRKACA, but not catalytically inactive kinase, caused similar transcriptomic changes in primary human hepatocytes, recapitulating the changes observed in FLC. Consistently, tumors in patients missing a regulatory subunit or harboring an ATP1B1::PRKACA fusion were indistinguishable from FLC based on the histopathological, transcriptomic, and drug-response profiles. Together, these findings indicate that the DNAJB1 domain of DNAJB1::PRKACA is not required for FLC. Instead, changes in PKA activity and localization determine the FLC phenotype. Significance: Alterations leading to unconstrained protein kinase A signaling, regardless of the presence or absence of PRKACA fusions, drive the phenotypes of fibrolamellar hepatocellular carcinoma, reshaping understanding of the pathogenesis of this rare liver cancer.

Indexed as

Carcinoma, HepatocellularCyclic AMP-Dependent Protein Kinase Catalytic SubunitsHSP40 Heat-Shock ProteinsLiver NeoplasmsGene Expression Regulation, NeoplasticHumansOncogene Proteins, FusionSodium-Potassium-Exchanging ATPaseATP1B1 protein, humanCyclic AMP-Dependent Protein Kinase Catalytic SubunitsDNAJB1 protein, humanHSP40 Heat-Shock ProteinsOncogene Proteins, FusionPRKACA protein, humanSodium-Potassium-Exchanging ATPase

Identifiers

PMID38888469
PMCPMC11325150

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.