Evidence map›Paper›PMID 38888046›Full record

ArticleBiotechnology progress

Evaluation of TrpM and PsiD substrate promiscuity reveals new biocatalytic capabilities.

Fiona C Kanis, Caroline N Broude, Elle B Hellwarth, William J Gibbons, Abhishek K Sen, Alexandra M Adams, Xin Wang, J Andrew Jones

Abstract read
In one paragraph

Article in Biotechnology progress. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Reconstituting a two-step pathway forMetabolic engineering communications · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fiona C KanisDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.
Caroline N BroudeDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.
Elle B HellwarthDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.
William J GibbonsDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.
Abhishek K SenDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.
Alexandra M AdamsDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.
Xin WangDepartment of Microbiology, Miami University, Oxford, Ohio, USA.
J Andrew JonesDepartment of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, Ohio, USA.ORCID 0000-0002-9068-2126

Funding

PsyBio Therapeutics
6 · The paper itself

Abstract

N-methylated tryptamines, such as the hallucinogenic natural products, psilocybin and N,N-dimethyltryptamine (DMT), are gaining interest from the medical community due to their potential as next generation treatments for mental health disorders. The clinical relevance of these compounds has driven scientists to develop biosynthetic production routes to a number of tryptamine drug candidates, and efforts are ongoing to expand and further develop these biosynthetic capabilities. To that end, we have further characterized the substrate preferences of two enzymes involved in tryptamine biosynthesis: TrpM, a tryptophan N-methyltransferase from Psilocybe serbica, and PsiD, the gateway decarboxylase of the psilocybin biosynthesis pathway. Here, we show that TrpM can N-methylate the non-native amino acid substrate, 4-hydroxytryptophan, a key intermediate in the Escherichia coli-based recombinant psilocybin biosynthesis pathway. However, the ability to incorporate TrpM into a functional psilocybin biosynthesis pathway was thwarted by PsiD's inability to use N,N-dimethyl-4-hydroxytryptophan as substrate, under the culturing conditions tested, despite demonstrating activity on N-methylated and 4-hydroxylated tryptophan derivatives individually. Taken together, this work expands upon the known substrates for TrpM and PsiD, further increasing the diversity of tryptamine biosynthetic products.

Indexed as

TryptaminesAromatic-L-Amino-Acid DecarboxylasesBiocatalysisEscherichia coliMethyltransferasesPsilocybePsilocybinSubstrate SpecificityAromatic-L-Amino-Acid DecarboxylasesMethyltransferasesPsilocybintryptamineTryptaminesDMT biosynthesisPsiDsubstrate promiscuityTrpMtryptophan decarboxylasetryptophan N‐methyltransferase

Identifiers

PMID38888046
PMCPMC11659798

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.