Evidence map›Paper›PMID 38887591›Full record

ArticleItalian journal of food safety2024

Shotgun metagenomic investigation of foodborne pathogens and antimicrobial resistance genes in artisanal fermented meat products from the Mediterranean area.

Valentina Indio, Chiara Oliveri, Alex Lucchi, Federica Savini, Ursula Gonzales-Barron, Panagiotis Skandamis, Fouad Achemchem, Gerardo Manfreda, Andrea Serraino, Alessandra De Cesare

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In one paragraph

Article in Italian journal of food safety, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Valentina IndioDepartment of Veterinary Medical Science, University of Bologna, Ozzano dell'Emilia, Italy.
Chiara OliveriDepartment of Physics and Astronomy "Augusto Righi", University of Bologna, Italy.
Alex LucchiDepartment of Agricultural and Food Sciences, University of Bologna, Italy.
Federica SaviniDepartment of Veterinary Medical Science, University of Bologna, Ozzano dell'Emilia, Italy.
Ursula Gonzales-BarronMountain Research Center (CIMO), Polytechnic Institute of Bragança, Portugal.
Panagiotis SkandamisLaboratory of Food Quality Control and Hygiene, Department of Food Science and Human Nutrition, Agricultural University of Athens, Greece.
Fouad AchemchemLASIME Laboratory, Agadir Superior School of Technology, Ibn Zohr University, Agadir, Morocco.
Gerardo ManfredaDepartment of Agricultural and Food Sciences, University of Bologna, Italy.
Andrea SerrainoDepartment of Veterinary Medical Science, University of Bologna, Ozzano dell'Emilia, Italy.
Alessandra De CesareDepartment of Veterinary Medical Science, University of Bologna, Ozzano dell'Emilia, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this pilot study, we compared the metagenomic profiles of different types of artisanal fermented meat products collected in Italy, Greece, Portugal, and Morocco to investigate their taxonomic profile, also in relation to the presence of foodborne pathogens and antimicrobial resistance genes. In addition, technical replicates of the same biological sample were tested to estimate the reproducibility of shotgun metagenomics. The taxonomic analysis showed a high level of variability between different fermented meat products at both the phylum and genus levels.

Indexed as

antimicrobial resistancebiological hazardsfermented meatMediterranean productionsshotgun metagenomic

Identifiers

PMID38887591
PMCPMC11181117

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.