Evidence map›Paper›PMID 38886907›Full record

ArticleThoracic cancer2024

Exploring the immune landscape and drug prediction of an M2 tumor-associated macrophage-related gene signature in EGFR-negative lung adenocarcinoma.

Yajie Huang, Yaozhong Zhang, Xiaoyang Duan, Ran Hou, Qi Wang, Jian Shi

Abstract read
In one paragraph

Article in Thoracic cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yajie HuangDepartment of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.ORCID 0000-0003-1533-5439
Yaozhong ZhangDepartment of Infectious Diseases, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
Xiaoyang DuanDepartment of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
Ran HouDepartment of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
Qi WangDepartment of Endoscopy, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
Jian ShiDepartment of Medical Oncology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.

Funding

Health Commission Medical Science Research Project of Hebei Province 20240093
6 · The paper itself

Abstract

backgroundImproving immunotherapy efficacy for EGFR-negative lung adenocarcinoma (LUAD) patients remains a critical challenge, and the therapeutic effect of immunotherapy is largely determined by the tumor microenvironment (TME). Tumor-associated macrophages (TAMs) are the top-ranked immune infiltrating cells in the TME, and M2-TAMs exert potent roles in tumor promotion and chemotherapy resistance. An M2-TAM-based prognostic signature was constructed by integrative analysis of single-cell RNA-seq (scRNA-seq) and bulk RNA-seq data to reveal the immune landscape and select drugs in EGFR-negative LUAD.

methodsM2-TAM-based biomarkers were obtained from the intersection of bulk RNA-seq data and scRNA-seq data. After consensus clustering of EGFR-negative LUAD into different clusters based on M2-TAM-based genes, we compared the prognosis, clinical features, estimate scores, immune infiltration, and checkpoint genes among the clusters. Next, we combined univariate Cox and LASSO regression analyses to establish an M2-TAM-based prognostic signature.

resultsCCL20, HLA-DMA, HLA-DRB5, KLF4, and TMSB4X were verified as prognostic M2-like TAM-related genes by univariate Cox and LASSO regression analyses. IPS and TMB analyses revealed that the high-risk group responded better to common immunotherapy.

conclusionThe study shows the potential of the M2-like TAM-related gene signature in EGFR-negative LUAD, explores the immune landscape based on M2-like TAM-related genes, and predict immunotherapy response of patients with EGFR-negative LUAD, providing a new insight for individualized treatment.

Indexed as

Adenocarcinoma of LungErbB ReceptorsLung NeoplasmsTumor-Associated MacrophagesBiomarkers, TumorFemaleGene Expression Regulation, NeoplasticHumansKruppel-Like Factor 4MalePrognosisTumor MicroenvironmentBiomarkers, TumorEGFR protein, humanErbB ReceptorsKruppel-Like Factor 4bulk RNA‐seqEGFR‐negative lung adenocarcinomaimmune landscapesingle‐cell RNA‐seqtumor‐associated macrophage

Identifiers

PMID38886907
PMCPMC11260554

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.