Evidence map›Paper›PMID 38885264›Full record

ArticlePLoS pathogens2024

MicroRNA-focused CRISPR/Cas9 screen identifies miR-142 as a key regulator of Epstein-Barr virus reactivation.

Yan Chen, Rodney P Kincaid, Kelley Bastin, Devin N Fachko, Rebecca L Skalsky

Abstract read
In one paragraph

Article in PLoS pathogens, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yan ChenVaccine and Gene Therapy Institute, Oregon Health & Science University, Beaverton, Oregon, United States of America.
Rodney P KincaidVaccine and Gene Therapy Institute, Oregon Health & Science University, Beaverton, Oregon, United States of America.
Kelley BastinVaccine and Gene Therapy Institute, Oregon Health & Science University, Beaverton, Oregon, United States of America.
Devin N FachkoVaccine and Gene Therapy Institute, Oregon Health & Science University, Beaverton, Oregon, United States of America.
Rebecca L SkalskyVaccine and Gene Therapy Institute, Oregon Health & Science University, Beaverton, Oregon, United States of America.ORCID 0000-0003-2967-9478

Funding

microRNA Regulation of Gamma-herpesvirus Latency and ReactivationR01AI143620 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI SKALSKY, REBECCA L · 2019 to 2023
$2.5M
NIAID NIH HHS R01 AI143620
6 · The paper itself

Abstract

Reactivation from latency plays a significant role in maintaining persistent lifelong Epstein-Barr virus (EBV) infection. Mechanisms governing successful activation and progression of the EBV lytic phase are not fully understood. EBV expresses multiple viral microRNAs (miRNAs) and manipulates several cellular miRNAs to support viral infection. To gain insight into the host miRNAs regulating transitions from EBV latency into the lytic stage, we conducted a CRISPR/Cas9-based screen in EBV+ Burkitt lymphoma (BL) cells using anti-Ig antibodies to crosslink the B cell receptor (BCR) and induce reactivation. Using a gRNA library against >1500 annotated human miRNAs, we identified miR-142 as a key regulator of EBV reactivation. Genetic ablation of miR-142 enhanced levels of immediate early and early lytic gene products in infected BL cells. Ago2-PAR-CLIP experiments with reactivated cells revealed miR-142 targets related to Erk/MAPK signaling, including components directly downstream of the B cell receptor (BCR). Consistent with these findings, disruption of miR-142 enhanced SOS1 levels and Mek phosphorylation in response to surface Ig cross-linking. Effects could be rescued by inhibitors of Mek (cobimetinib) or Raf (dabrafenib). Taken together, these results show that miR-142 functionally regulates SOS1/Ras/Raf/Mek/Erk signaling initiated through the BCR and consequently, restricts EBV entry into the lytic cycle.

Indexed as

CRISPR-Cas SystemsEpstein-Barr Virus InfectionsHerpesvirus 4, HumanMicroRNAsVirus ActivationVirus LatencyBurkitt LymphomaCell Line, TumorHumansMicroRNAsMIRN142 microRNA, human

Identifiers

PMID38885264
PMCPMC11213311

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.