Evidence map›Paper›PMID 38883847›Full record

ArticleComputational and structural biotechnology journal2024

NanoConstruct: A web application builder of ellipsoidal nanoparticles for the investigation of their crystal growth, stability, and the calculation of atomistic descriptors.

Panagiotis D Kolokathis, Dimitrios Zouraris, Evangelos Voyiatzis, Nikolaos K Sidiropoulos, Andreas Tsoumanis, Georgia Melagraki, Kaido Tämm, Iseult Lynch, Antreas Afantitis

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Panagiotis D KolokathisNovaMechanics MIKE, Piraeus 18545, Greece.
Dimitrios ZourarisNovaMechanics Ltd, Nicosia 1070, Cyprus.
Evangelos VoyiatzisNovaMechanics Ltd, Nicosia 1070, Cyprus.
Nikolaos K SidiropoulosNovaMechanics MIKE, Piraeus 18545, Greece.
Andreas TsoumanisNovaMechanics MIKE, Piraeus 18545, Greece.
Georgia MelagrakiDivision of Physical Sciences and Applications, Hellenic Military Academy, Vari 16672, Greece.
Kaido TämmInstitute of Chemistry, University of Tartu, Tartu 50090, Estonia.
Iseult LynchEntelos Institute, Larnaca 6059, Cyprus.
Antreas AfantitisNovaMechanics MIKE, Piraeus 18545, Greece.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NanoConstruct is a state-of-the-art computational tool that enables a) the digital construction of ellipsoidal neutral energy minimized nanoparticles (NPs) in vacuum through its graphical user-friendly interface, and b) the calculation of NPs atomistic descriptors. It allows the user to select NP's shape and size by inserting its ellipsoidal axes and rotation angle while the NP material is selected by uploading its Crystallography Information File (CIF). To investigate the stability of materials not yet synthesised, NanoConstruct allows the substitution of the chemical elements of an already synthesized material with chemical elements that belong into the same group and neighbouring rows of the periodic table. The process is divided into three stages: 1) digital construction of the unit cell, 2) digital construction of NP using geometry rules and keeping its stoichiometry and 3) energy minimization of the geometrically constructed NP and calculation of its atomistic descriptors. In this study, NanoConstruct was applied for the investigation of the crystal growth of Zirconia (ZrO

Indexed as

AutomationCrystal growthDescriptorDigital constructionEllipsoidalEnergy minimizationNanoparticleStabilityZirconia (ZrO2)

Identifiers

PMID38883847
PMCPMC11179235

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.