Evidence map›Paper›PMID 38882711›Full record

ArticleF1000Research2023

The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity.

Robert M Waterhouse, Anne-Françoise Adam-Blondon, Bachir Balech, Endre Barta, Physilia Ying Shi Chua, Valeria Di Cola, Katharina F Heil, Graham M Hughes, Lars S Jermiin, Matúš Kalaš and 9 more

Abstract read
In one paragraph

Article in F1000Research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Robert M WaterhouseDepartment of Ecology and Evolution, SIB Swiss Institute of Bioinformatics, Universite de Lausanne, Lausanne, Vaud, 1015, Switzerland.ORCID 0000-0003-4199-9052
Anne-Françoise Adam-BlondonINRAE, BioinfOmics, Plant Bioinformatics Facility, Universite Paris-Saclay, Gif-sur-Yvette, Île-de-France, 78026, France.
Bachir BalechIstituto di Biomembrane, Bioenergetica e Biotecnologie Molecolari, Bari, 70126, Italy.ORCID 0000-0002-4419-0729
Endre BartaInstitute of Genetics and Biotechnology, Magyar Agrar- es Elettudomanyi Egyetem, Gödöllő, Pest County, Hungary.ORCID 0000-0002-6753-0714
Physilia Ying Shi ChuaELIXIR, Wellcome Genome Campus, Hinxton, England, CB10 1SD, UK.ORCID 0000-0001-7229-4480
Valeria Di ColaSIB Swiss Institute of Bioinformatics, Lausanne, Vaud, 1015, Switzerland.
Katharina F HeilELIXIR, Wellcome Genome Campus, Hinxton, England, CB10 1SD, UK.ORCID 0000-0003-3341-3736
Graham M HughesSchool of Biology and Environmental Science, University College Dublin, Dublin, Leinster, Ireland.ORCID 0000-0003-3088-345X
Lars S JermiinSystems Biology Ireland, School of Medicine, University College Dublin, Dublin, Leinster, Ireland.ORCID 0000-0002-9619-3809
Matúš KalašDepartment of Informatics, Universitetet i Bergen, Bergen, Hordaland, Norway.ORCID 0000-0002-1509-4981
Jerry LanfearELIXIR, Wellcome Genome Campus, Hinxton, England, CB10 1SD, UK.ORCID 0000-0002-8007-5568
Evangelos PafilisInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Heraklion, 71003, Greece.
Patricia M PalagiSIB Swiss Institute of Bioinformatics, Lausanne, Vaud, 1015, Switzerland.ORCID 0000-0001-9062-6303
Aristotelis C PapageorgiouDepartment of Molecular Biology and Genetics, Democritus University of Thrace, Alexandroupolis, Greece.
Joana PaupérioEMBL-EBI, Wellcome Genome Campus, Hinxton, England, CB10 1SD, UK.ORCID 0000-0003-2569-0768
Fotis PsomopoulosInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thessaloniki, Greece.ORCID 0000-0002-0222-4273
Niels RaesNaturalis Biodiversity Center, Leiden, South Holland, The Netherlands.ORCID 0000-0002-4329-4892
Josephine BurginEMBL-EBI, Wellcome Genome Campus, Hinxton, England, CB10 1SD, UK.
Toni GabaldónInstitut de Recerca Biomedica, Barcelona, Catalonia, Spain.ORCID 0000-0003-0019-1735

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biodiversity loss is now recognised as one of the major challenges for humankind to address over the next few decades. Unless major actions are taken, the sixth mass extinction will lead to catastrophic effects on the Earth's biosphere and human health and well-being. ELIXIR can help address the technical challenges of biodiversity science, through leveraging its suite of services and expertise to enable data management and analysis activities that enhance our understanding of life on Earth and facilitate biodiversity preservation and restoration. This white paper, prepared by the ELIXIR Biodiversity Community, summarises the current status and responses, and presents a set of plans, both technical and community-oriented, that should both enhance how ELIXIR Services are applied in the biodiversity field and how ELIXIR builds connections across the many other infrastructures active in this area. We discuss the areas of highest priority, how they can be implemented in cooperation with the ELIXIR Platforms, and their connections to existing ELIXIR Communities and international consortia. The article provides a preliminary blueprint for a Biodiversity Community in ELIXIR and is an appeal to identify and involve new stakeholders.

Indexed as

BiodiversityConservation of Natural ResourcesHumansBiodiversity InformaticsBiodiversity NetworksCommunity RoadmapData ScienceELIXIR StrategyEnvironmental SystemsWhite Paper

Identifiers

PMID38882711
PMCPMC11179050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.