Evidence map›Paper›PMID 38881500›Full record

ArticleMicrobial biotechnology2024

Identification and expression of MarCE, a marine carboxylesterase with synthetic ester-degrading activity.

Clodagh M Carr, Frederike Göttsch, Bruno Francesco Rodrigues de Oliveira, Pedro A Sánchez Murcia, Stephen A Jackson, Ren Wei, David J Clarke, Uwe T Bornscheuer, Alan D W Dobson

Abstract read
In one paragraph

Article in Microbial biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Clodagh M CarrSchool of Microbiology, University College Cork, Cork, Ireland.ORCID 0000-0002-9140-2800
Frederike GöttschDepartment of Biotechnology and Enzyme Catalysis, Institute of Biochemistry, University of Greifswald, Greifswald, Germany.
Bruno Francesco Rodrigues de OliveiraDepartment of Microbiology and Parasitology, Biomedical Institute, Fluminense Federal University, Niterói, Brazil.
Pedro A Sánchez MurciaLaboratory of Computer-Aided Molecular Design, Division of Medicinal Chemistry, Otto-Loewi Research Center, Medical University of Graz, Graz, Austria.
Stephen A JacksonSchool of Microbiology, University College Cork, Cork, Ireland.
Ren WeiDepartment of Biotechnology and Enzyme Catalysis, Institute of Biochemistry, University of Greifswald, Greifswald, Germany.ORCID 0000-0003-3876-1350
David J ClarkeSchool of Microbiology, University College Cork, Cork, Ireland.
Uwe T BornscheuerDepartment of Biotechnology and Enzyme Catalysis, Institute of Biochemistry, University of Greifswald, Greifswald, Germany.
Alan D W DobsonSchool of Microbiology, University College Cork, Cork, Ireland.

Funding

Horizon 2020 Framework Programme 870294Synthesis and Solid State Pharmaceutical Centre SSPC-2- 12/RC/2275Synthesis and Solid State Pharmaceutical Centre SSPC-3- 12/RC/2275_2
6 · The paper itself

Abstract

Carboxylic ester hydrolases with the capacity to degrade polyesters are currently highly sought after for their potential use in the biological degradation of PET and other chemically synthesized polymers. Here, we describe MarCE, a carboxylesterase family protein identified via genome mining of a Maribacter sp. isolate from the marine sponge Stelligera stuposa. Based on phylogenetic analysis, MarCE and its closest relatives belong to marine-associated genera from the Cytophaga-Flavobacterium-Bacteroides taxonomic group and appear evolutionarily distinct to any homologous carboxylesterases that have been studied to date in terms of structure or function. Molecular docking revealed putative binding of BHET, a short-chain PET derivative, onto the predicted MarCE three-dimensional structure. The synthetic ester-degrading activity of MarCE was subsequently confirmed by MarCE-mediated hydrolysis of 2 mM BHET substrate, indicated by the release of its breakdown products MHET and TPA, which were measured, respectively, as 1.28 and 0.12 mM following 2-h incubation at 30°C. The findings of this study provide further insight into marine carboxylic ester hydrolases, which have the potential to display unique functional plasticity resulting from their adaptation to complex and fluctuating marine environmentsw.

Indexed as

Aquatic OrganismsCarboxylesteraseAnimalsEstersGene ExpressionMolecular Docking SimulationPhylogenyPoriferaCarboxylesteraseEsters

Identifiers

PMID38881500
PMCPMC11180994

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.