Evidence map›Paper›PMID 38880984›Full record

ArticleClinical and translational medicine2024

One step forward towards deep-learning protein complex structure prediction by precise multiple sequence alignment construction.

Wei Zheng, Qiqige Wuyun, Yang Zhang

Abstract readLetter
PubMed Full text at PMC Publisher
In one paragraph

Article in Clinical and translational medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Wei ZhengDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA.
Qiqige WuyunDepartment of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, USA.
Yang ZhangCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.ORCID 0000-0002-2739-1916

Funding

Structure-based functional annotation of microbial genomesR01AI134678 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Lydia Petra Freddolino, SCOTT J. HULTGREN · 2018 to 2026
$6.5M
Advanced approaches to protein structure predictionR35GM136422 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHANG, YANG · 2020 to 2021
$946k
High-Performance Computing Cluster for Biomedical ResearchS10OD026825 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ATHEY, BRIAN DAVID · 2020 to 2020
$600k
National Institute of Allergy and Infectious Diseases AI134678National Science Foundation DBI2030790National Science Foundation IIS1901191National Science Foundation MTM2025426National University of Singapore Start-up Grant A-80001129-00-00NIGMS NIH HHS GM136422NIGMS NIH HHS S10OD026825
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Deep LearningProtein ConformationProteinsSequence AlignmentProteinsantibody−antigen interactionsdeep‐learningmultiple sequence alignmentsprotein−protein complex structure prediction

Identifiers

PMID38880984
PMCPMC11180690

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.