Evidence map›Paper›PMID 38880944›Full record

ArticleThe plant genome2024

Genome-wide association study for yield and quality of granulated cassava processed product.

Cynthia Idhigu Aghogho, Siraj Ismail Kayondo, Saviour J Y Eleblu, Adenike Ige, Isaac Asante, Samuel K Offei, Elizabeth Parkes, Chiedozie Egesi, Edwige Gaby Nkouaya Mbanjo, Trushar Shah and 2 more

Abstract read
In one paragraph

Article in The plant genome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Cynthia Idhigu AghoghoWest Africa Centre for Crop Improvement (WACCI), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana.ORCID https://orcid.org/0000-0003-0244-3975
Siraj Ismail KayondoInternational Institute of Tropical Agriculture (IITA), Eastern Africa Hub, Dar es Salaam, Tanzania.ORCID https://orcid.org/0000-0002-3212-5727
Saviour J Y ElebluWest Africa Centre for Crop Improvement (WACCI), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana.
Adenike IgeDepartment of Agronomy and Plant Genetics, University of Minnesota, Minneapolis, Minnesota, USA.
Isaac AsanteWest Africa Centre for Crop Improvement (WACCI), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana.
Samuel K OffeiWest Africa Centre for Crop Improvement (WACCI), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana.
Elizabeth ParkesInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.
Chiedozie EgesiNational Root Crops Research Institute, Umuahia, Nigeria.
Edwige Gaby Nkouaya MbanjoInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.
Trushar ShahInternational Institute of Tropical Agriculture (IITA), c/o ILRI, Nairobi, Kenya.
Peter KulakowInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.ORCID https://orcid.org/0000-0002-7574-2645
Ismail Y RabbiInternational Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.

Funding

Bill & Melinda Gates Foundation INV-007637Deutscher Akademischer Austauschdienst
6 · The paper itself

Abstract

The starchy storage roots of cassava are commonly processed into a variety of products, including cassava granulated processed products (gari). The commercial value of cassava roots depends on the yield and quality of processed products, directly influencing the acceptance of new varieties by farmers, processors, and consumers. This study aims to estimate genetic advance through phenotypic selection and identify genomic regions associated and candidate genes linked with gari yield and quality. Higher single nucleotide polymorphism (SNP)-based heritability estimates compared to broad-sense heritability estimates were observed for most traits highlighting the influence of genetic factors on observed variation. Using genome-wide association analysis of 188 clones, genotyped using 53,150 genome-wide SNPs, nine SNPs located on seven chromosomes were significantly associated with peel loss, gari yield, color parameters for gari and eba, bulk density, swelling index, and textural properties of eba. Future research will focus on validating and understanding the functions of identified genes and their influence on gari yield and quality traits.

Indexed as

Genome-Wide Association StudyManihotPolymorphism, Single NucleotidePhenotypePlant Roots

Identifiers

PMID38880944
PMCPMC12806961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.