Evidence map›Paper›PMID 38880039›Full record

ArticlePathology, research and practice2024

ALYREF/THOC4 expression and cell growth modulation in retinoblastoma.

Gail M Seigel, Onyekwere Onwumere, Moira Sauane, Sual Lopez, Enyuan Shang, Habiba Habiba, Stephen Redenti, Hans E Grossniklaus, Rajendra Gharbaran

Abstract read
In one paragraph

Article in Pathology, research and practice, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Update on Retinoblastoma Therapies.Medicina (Kaunas, Lithuania) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Gail M SeigelDepartment of Communicative Disorders and Sciences, University at Buffalo, 3435 Main Street, Buffalo, NY 14214, USA.
Onyekwere OnwumereDepartment of Biological Sciences, Lehman College/City University of New York, Bronx, NY, USA; Biology Doctoral Program, The Graduate School and University Center, City University of New York, 365 5th Avenue, New York, NY 10016 USA, USA.
Moira SauaneDepartment of Biological Sciences, Lehman College/City University of New York, Bronx, NY, USA; Biology Doctoral Program, The Graduate School and University Center, City University of New York, 365 5th Avenue, New York, NY 10016 USA, USA.
Sual LopezDepartment of Biological Sciences, Lehman College/City University of New York, Bronx, NY, USA.
Enyuan ShangDepartment of Biological Sciences, Bronx Community College/City University of New York, 2155 University Avenue, Bronx, NY 10453, USA.
Habiba HabibaDepartment of Biological Sciences, Lehman College/City University of New York, Bronx, NY, USA.
Stephen RedentiDepartment of Biological Sciences, Lehman College/City University of New York, Bronx, NY, USA; Biology Doctoral Program, The Graduate School and University Center, City University of New York, 365 5th Avenue, New York, NY 10016 USA, USA.
Hans E GrossniklausDepartment of Ophthalmology, Emory University, Atlanta, GA, USA.
Rajendra GharbaranDepartment of Biological Sciences, Lehman College/City University of New York, Bronx, NY, USA; Department of Biological Sciences, Bronx Community College/City University of New York, 2155 University Avenue, Bronx, NY 10453, USA. Electronic address: rajendra.gharbaran@bcc.cuny.edu.

Funding

P30-Core Grant for Vision Research Core CP30EY006360 · NEI · EMORY UNIVERSITY · PI NICKERSON, JOHN M · 1986 to 2025
$15.3M
VIsion Science Training in AtlantaT32EY007092 · NEI · EMORY UNIVERSITY · PI Machelle T. Pardue · 1985 to 2026
$4.6M
Modeling Photoreceptor Migration in Biomimetic Microenvironments to Optimize TransplantationSC3GM113782 · NIGMS · HERBERT H. LEHMAN COLLEGE · PI REDENTI, STEPHEN M · 2015 to 2024
$898k
Translation Initiation Inhibitor for Cancer TherapyR16GM145561 · NIGMS · HERBERT H. LEHMAN COLLEGE · PI SAUANE, MOIRA · 2022 to 2025
$570k
NEI NIH HHS P30 EY006360NEI NIH HHS T32 EY007092NIGMS NIH HHS R16 GM145561NIGMS NIH HHS SC3 GM113782
6 · The paper itself

Abstract

In this study, we tested the hypothesis that ALYREF/THOC4, a poor prognostic factor in different cancer types, has potential as a drug target and prognostic biomarker for retinoblastoma (RB). Immunostaining (IHC), Western blot, and RT-qPCR analyses detected overexpression of ALYREF in the RB cell lines Y79, RB143, WERI-RB1, and RB116. IHC analysis on RB tumor array showed that 11/14 of RB tumors were ALYREF+ to varying degrees, with eight tumors at maximum 3+ intensity. The IHC analysis also detected ALYREF+ cells in normal retina, mainly in the inner nuclear and ganglion cell layer, while some tumor-bearing human eyes were ALYREF+ in the optic nerve suggesting a role in optic invasion/tumor invasion. The expression of ALYREF within the tumor itself, in the optic nerve, as well as in adjacent "normal" retina, suggest that this pattern of expression may lead to ALYREF being a potentially useful prognostic indicator for RB, as it is for other tumors. siRNA knockdown of ALYREF resulted in a 40 % decrease in cell growth in both WERI-RB1 and Y79 cells (p<0.05) and this was associated with decreased expression of mRNAs for the cell proliferation markers Ki67 and PCNA (p<0.005). These results suggest a role for ALYREF in RB cell growth regulation and its potential as both a target and a biomarker for tumor growth inhibition by anti-cancer therapies.

Indexed as

Cell ProliferationRetinal NeoplasmsRetinoblastomaBiomarkers, TumorCell Line, TumorHumansBiomarkers, TumorALYREF/THOC4MetastasisProliferationRB116RetinoblastomaWERI-RB1Y79

Identifiers

PMID38880039
PMCPMC12439426

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.