Evidence map›Paper›PMID 38879593›Full record

ArticleNature communications2024

Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification.

Bart Van Puyvelde, Christie L Hunter, Maxim Zhgamadze, Sudha Savant, Y Oliver Wang, Esthelle Hoedt, Koen Raedschelders, Matt Pope, Carissa A Huynh, V Krishnan Ramanujan and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Single-Injection Multi-Omics Analysis by Direct Infusion Mass Spectrometry.Angewandte Chemie (International ed. in English) · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Bart Van Puyvelde *ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Ghent University, 9000, Ghent, Belgium.ORCID http://orcid.org/0000-0002-7368-1762
Christie L Hunter *SCIEX, Redwood City, CA, 94065, USA.
Maxim ZhgamadzeAdvanced Clinical Biosystems Research Institute, Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
Sudha SavantBeckman Coulter Life Sciences, Brea, CA, USA.
Y Oliver WangAdvanced Clinical Biosystems Research Institute, Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.ORCID http://orcid.org/0000-0003-4106-6893
Esthelle HoedtAdvanced Clinical Biosystems Research Institute, Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
Koen RaedscheldersAdvanced Clinical Biosystems Research Institute, Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
Matt PopeSISCAPA Assay Technologies Inc., Box 53309, Washington, DC, 20009, USA.
Carissa A HuynhCedars Sinai Biobank & Research Pathology Resource, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
V Krishnan RamanujanCedars Sinai Biobank & Research Pathology Resource, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
Warren TourtellotteCedars Sinai Biobank & Research Pathology Resource, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
Morteza RazaviSISCAPA Assay Technologies Inc., Box 53309, Washington, DC, 20009, USA.
N Leigh AndersonSISCAPA Assay Technologies Inc., Box 53309, Washington, DC, 20009, USA.
Geert MartensAZ Delta Medical Laboratories, AZ Delta General Hospital, 8800, Roeselare, Belgium.ORCID http://orcid.org/0000-0003-1208-6289
Dieter DeforceProGenTomics, Laboratory of Pharmaceutical Biotechnology, Ghent University, 9000, Ghent, Belgium.ORCID http://orcid.org/0000-0002-0635-661X
Qin FuAdvanced Clinical Biosystems Research Institute, Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA.
Maarten DhaenensProGenTomics, Laboratory of Pharmaceutical Biotechnology, Ghent University, 9000, Ghent, Belgium. Maarten.Dhaenens@ugent.be.ORCID http://orcid.org/0000-0002-9801-3509
Jennifer E Van EykAdvanced Clinical Biosystems Research Institute, Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, 90048, USA. Jennifer.VanEyk@cshs.org.ORCID http://orcid.org/0000-0001-9050-148X

Funding

Diversity and Determinants of the Immune-Inflammatory Response to SARS-CoV-2U54CA260591 · NCI · CEDARS-SINAI MEDICAL CENTER · PI FIGUEIREDO, JANE C., KARIN, MICHAEL · 2020 to 2024
$9.1M
Post-translational modification and protein quantification of plasma and CSFU01NS115658 · NINDS · CEDARS-SINAI MEDICAL CENTER · PI SOBHANI, KIMIA, VAN EYK, JENNIFER E · 2019 to 2019
$1.9M
EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 101073924Fonds Wetenschappelijk Onderzoek (Research Foundation Flanders) V422522N and 1278023NNCI NIH HHS U54 CA260591NINDS NIH HHS U01 NS115658U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) 1U54CA260591-01 and U01 NS115658-01
6 · The paper itself

Abstract

The global scientific response to COVID 19 highlighted the urgent need for increased throughput and capacity in bioanalytical laboratories, especially for the precise quantification of proteins that pertain to health and disease. Acoustic ejection mass spectrometry (AEMS) represents a much-needed paradigm shift for ultra-fast biomarker screening. Here, a quantitative AEMS assays is presented, employing peptide immunocapture to enrich (i) 10 acute phase response (APR) protein markers from plasma, and (ii) SARS-CoV-2 NCAP peptides from nasopharyngeal swabs. The APR proteins were quantified in 267 plasma samples, in triplicate in 4.8 h, with %CV from 4.2% to 10.5%. SARS-CoV-2 peptides were quantified in triplicate from 145 viral swabs in 10 min. This assay represents a 15-fold speed improvement over LC-MS, with instrument stability demonstrated across 10,000 peptide measurements. The combination of speed from AEMS and selectivity from peptide immunocapture enables ultra-high throughput, reproducible quantitative biomarker screening in very large cohorts.

Indexed as

BiomarkersCOVID-19Mass SpectrometrySARS-CoV-2Coronavirus Nucleocapsid ProteinsHumansPeptidesPhosphoproteinsBiomarkersCoronavirus Nucleocapsid Proteinsnucleocapsid phosphoprotein, SARS-CoV-2PeptidesPhosphoproteins

Identifiers

PMID38879593
PMCPMC11180209

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.