Evidence map›Paper›PMID 38874629›Full record

ArticleCurrent microbiology2024

Isolation and Genomic Characterization of Schaalia turicensis from a Patient with Gonococcal Urethritis, Thailand.

Natakorn Nokchan, Thidathip Wongsurawat, Piroon Jenjaroenpun, Perapon Nitayanon, Charinrat Saechan, Witoon Thirakittiwatthana, Chanwit Tribuddharat

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In one paragraph

Article in Current microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Natakorn NokchanDepartment of Microbiology, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.ORCID http://orcid.org/0000-0001-8472-613X
Thidathip WongsurawatDepartment of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Piroon JenjaroenpunDepartment of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Perapon NitayanonDepartment of Microbiology, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Charinrat SaechanFaculty of Medical Technology, Prince of Songkla University, Songkhla, Thailand.ORCID http://orcid.org/0000-0001-5537-0488
Witoon ThirakittiwatthanaDepartment of Medical Technology, Faculty of Science and Technology, Bansomdejchaopraya Rajabhat University, Bangkok, Thailand.
Chanwit TribuddharatDepartment of Microbiology, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand. chanwit.tri@mahidol.ac.th.ORCID http://orcid.org/0000-0002-0642-757X

Funding

NSRF via the Program Management Unit for Human Resources & Institutional Development, Research and Innovation B13F660074Royal Golden Jubilee (RGJ) Ph.D. Programme PHD/0025/2557
6 · The paper itself

Abstract

Schaalia turicensis is facultative anaerobic Gram-positive bacillus that commonly inhabits the oropharynx, gastrointestinal, and genitourinary tract of healthy individuals. This organism has been co-isolated with Neisseria gonorrhoeae from 15-year-old Thai male patient with gonococcal urethritis in Bangkok, Thailand. In this study, we characterized the class 1 integron in S. turicensis isolate using whole-genome sequencing and bioinformatics analysis. Sequencing analysis confirmed the presence of an imperfect class 1 integron located on chromosome and a novel 24.5-kb-long composite transposon, named Tn7083. The transposon Tn7083 carried genes encoding chloramphenicol resistance (cmx), sulfonamide resistance (sul1), and aminoglycoside resistance [aph(6)-Id (strB), aph(3'')-Ib (strA), aph(3')-Ia].

Indexed as

Anti-Bacterial AgentsGenome, BacterialGonorrheaUrethritisAdolescentDNA Transposable ElementsDrug Resistance, BacterialHumansMaleMicrobial Sensitivity TestsNeisseria gonorrhoeaeThailandWhole Genome SequencingAnti-Bacterial AgentsDNA Transposable Elements

Identifiers

PMID38874629

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.