Evidence map›Paper›PMID 38874344›Full record

ArticleG3 (Bethesda, Md.)2024

The putative prenyltransferase Nus1 is required for filamentation in the human fungal pathogen Candida albicans.

Aiman Farheen, Nicola T Case, Jessie MacAlpine, Ci Fu, Nicole Robbins, Leah E Cowen

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aiman FarheenDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.
Nicola T CaseDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.ORCID 0000-0001-7692-3424
Jessie MacAlpineDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.ORCID 0000-0001-5367-9043
Ci FuDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.
Nicole RobbinsDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.
Leah E CowenDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.ORCID 0000-0001-5797-0110

Funding

Systematic Analysis of Morphogenesis, Commensalism, and Virulence in a Leading Human Fungal PathogenR01AI127375 · NIAID · UNIVERSITY OF TORONTO · PI LEAH Elizabeth Cowen · 2017 to 2026
$5.3M
Canada Graduate Scholarships Doctoral AwardsCanadian Institutes for Health ResearchCIHRCIHR Foundation FDN-154288NIAID NIH HHS R01 AI127375U.S. National Institutes of Health R01AI127375
6 · The paper itself

Abstract

Candida albicans is a major fungal pathogen of humans that can cause serious systemic infections in vulnerable immunocompromised populations. One of its virulence attributes is its capacity to transition between yeast and filamentous morphologies, but our understanding of this process remains incomplete. Here, we analyzed data from a functional genomic screen performed with the C. albicans Gene Replacement And Conditional Expression collection to identify genes crucial for morphogenesis in host-relevant conditions. Through manual scoring of microscopy images coupled with analysis of each image using a deep learning-based method termed Candescence, we identified 307 genes important for filamentation in tissue culture medium at 37°C with 5% CO2. One such factor was orf19.5963, which is predicted to encode the prenyltransferase Nus1 based on sequence homology to Saccharomyces cerevisiae. We further showed that Nus1 and its predicted interacting partner Rer2 are important for filamentation in multiple liquid filament-inducing conditions as well as for wrinkly colony formation on solid agar. Finally, we highlight that Nus1 and Rer2 likely govern C. albicans morphogenesis due to their importance in intracellular trafficking, as well as maintaining lipid homeostasis. Overall, this work identifies Nus1 and Rer2 as important regulators of C. albicans filamentation and highlights the power of functional genomic screens in advancing our understanding of gene function in human fungal pathogens.

Indexed as

Candida albicansFungal ProteinsDimethylallyltranstransferaseHumansHyphaeDimethylallyltranstransferaseFungal ProteinsCandida albicansfilamentationfungal pathogenlipid homeostasisRer2

Identifiers

PMID38874344
PMCPMC11304969

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.