Evidence map›Paper›PMID 38873078›Full record

ArticleChemical science2024

Structural characterization of PHOX2B and its DNA interaction shed light on the molecular basis of the +7Ala variant pathogenicity in CCHS.

Donatella Diana, Luciano Pirone, Luigi Russo, Gianluca D'Abrosca, Manoj Madheswaran, Roberta Benfante, Simona Di Lascio, Laura Caldinelli, Diego Fornasari, Clementina Acconcia and 8 more

Abstract read
In one paragraph

Article in Chemical science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Donatella DianaCNR - Institute of Biostructures and Bioimaging Via Pietro Castellino 111 80131 Naples Italy emilia.pedone@cnr.it.
Luciano PironeCNR - Institute of Biostructures and Bioimaging Via Pietro Castellino 111 80131 Naples Italy emilia.pedone@cnr.it.
Luigi RussoDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.
Gianluca D'AbroscaDepartment of Clinical and Experimental Medicine - University of Foggia Viale Luigi Pinto 71122 Foggia Italy.
Manoj MadheswaranDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.ORCID https://orcid.org/0009-0005-9642-571X
Roberta BenfanteDepartment of Medical Biotechnology and Translational Medicine (BIOMETRA), Università degli Studi di Milano Milan Italy.
Simona Di LascioDepartment of Medical Biotechnology and Translational Medicine (BIOMETRA), Università degli Studi di Milano Milan Italy.
Laura CaldinelliDepartment of Biotechnology and Life Sciences, University of Insubria Via J.H. Dunant 3 21100 Varese Italy.
Diego FornasariDepartment of Medical Biotechnology and Translational Medicine (BIOMETRA), Università degli Studi di Milano Milan Italy.
Clementina AcconciaDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.
Andrea CorvinoDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.
Nataliia VentserovaDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.
Loredano PollegioniDepartment of Biotechnology and Life Sciences, University of Insubria Via J.H. Dunant 3 21100 Varese Italy.
Carla IserniaDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.ORCID https://orcid.org/0000-0002-1504-2479
Sonia Di GaetanoCNR - Institute of Biostructures and Bioimaging Via Pietro Castellino 111 80131 Naples Italy emilia.pedone@cnr.it.
Gaetano MalgieriDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.
Emilia M PedoneCNR - Institute of Biostructures and Bioimaging Via Pietro Castellino 111 80131 Naples Italy emilia.pedone@cnr.it.ORCID https://orcid.org/0000-0003-0203-8611
Roberto FattorussoDepartment of Environmental, Biological and Pharmaceutical Sciences and Technologies - University of Campania "Luigi Vanvitelli" Via Vivaldi 43 81100 Caserta Italy gaetano.malgieri@unicampania.it roberto.fattorusso@unicampania.it.ORCID https://orcid.org/0000-0002-3539-5343

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An expansion of poly-alanine up to +13 residues in the C-terminus of the transcription factor PHOX2B underlies the onset of congenital central hypoventilation syndrome (CCHS). Recent studies demonstrated that the alanine tract expansion influences PHOX2B folding and activity. Therefore, structural information on PHOX2B is an important target for obtaining clues to elucidate the insurgence of the alanine expansion-related syndrome and also for defining a viable therapy. Here we report by NMR spectroscopy the structural characterization of the homeodomain (HD) of PHOX2B and HD + C-terminus PHOX2B protein, free and in the presence of the target DNA. The obtained structural data are then exploited to obtain a structural model of the PHOX2B-DNA interaction. In addition, the variant +7Ala, responsible for one of the most frequent forms of the syndrome, was analysed, showing different conformational proprieties in solution and a strong propensity to aggregation. Our data suggest that the elongated poly-alanine tract would be related to disease onset through a loss-of-function mechanism. Overall, this study paves the way for the future rational design of therapeutic drugs, suggesting as a possible therapeutic route the use of specific anti-aggregating molecules capable of preventing variant aggregation and possibly restoring the DNA-binding activity of PHOX2B.

Identifiers

PMID38873078
PMCPMC11168103

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.