Evidence map›Paper›PMID 38871854›Full record

ArticleNature structural & molecular biology2024

The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader.

Feng Wang, Qing He, Nina Y Yao, Michael E O'Donnell, Huilin Li

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Mechanistic diversity of clamp loading at small DNA gaps.The Journal of biological chemistry · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. PCNA is a nucleotide exchange factor for the clamp loader ATPase complex.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. PCNA is a Nucleotide Exchange Factor for the Clamp Loader ATPase Complex.bioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Feng Wang *Department of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA.
Qing He *Department of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA.
Nina Y YaoDNA Replication Laboratory and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Michael E O'DonnellDNA Replication Laboratory and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA. odonnel@rockefeller.edu.ORCID http://orcid.org/0000-0001-9002-4214
Huilin LiDepartment of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA. huilin.li@vai.org.ORCID http://orcid.org/0000-0001-8085-8928

Funding

Structural mechanism of DNA replicationR35GM131754 · NIGMS · VAN ANDEL RESEARCH INSTITUTE · PI Huilin Li · 2019 to 2026
$6.0M
Biochemistry of Eukaryotic Replication Fork and DNA RepairR35GM148159 · NIGMS · ROCKEFELLER UNIVERSITY · PI MICHAEL E O'DONNELL · 2023 to 2026
$1.7M
NIGMS NIH HHS R35 GM131754NIGMS NIH HHS R35 GM148159
6 · The paper itself

Abstract

Humans have three different proliferating cell nuclear antigen (PCNA) clamp-loading complexes: RFC and CTF18-RFC load PCNA onto DNA, but ATAD5-RFC can only unload PCNA from DNA. The underlying structural basis of ATAD5-RFC unloading is unknown. We show here that ATAD5 has two unique locking loops that appear to tie the complex into a rigid structure, and together with a domain that plugs the DNA-binding chamber, prevent conformation changes required for DNA binding, likely explaining why ATAD5-RFC is exclusively a PCNA unloader. These features are conserved in the yeast PCNA unloader Elg1-RFC. We observe intermediates in which PCNA bound to ATAD5-RFC exists as a closed planar ring, a cracked spiral or a gapped spiral. Surprisingly, ATAD5-RFC can open a PCNA gap between PCNA protomers 2 and 3, different from the PCNA protomers 1 and 3 gap observed in all previously characterized clamp loaders.

Indexed as

ATPases Associated with Diverse Cellular ActivitiesDNA-Binding ProteinsModels, MolecularProliferating Cell Nuclear AntigenCrystallography, X-RayDNAHumansProtein BindingProtein ConformationSaccharomyces cerevisiae ProteinsATAD5 protein, humanATPases Associated with Diverse Cellular ActivitiesDNADNA-Binding ProteinsPCNA protein, humanProliferating Cell Nuclear AntigenSaccharomyces cerevisiae Proteins

Identifiers

PMID38871854
PMCPMC11563871

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.