Evidence map›Paper›PMID 38870901›Full record

ReviewCell host & microbe2024

Host stress drives tolerance and persistence: The bane of anti-microbial therapeutics.

Sophie Helaine, Brian P Conlon, Kimberly M Davis, David G Russell

Abstract readReview
In one paragraph

Review in Cell host & microbe, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

  1. Review
  2. Article
  3. Reply to Gong et al.: Antibiotic tolerance coupled with limited benefit from drainage: Clinical challenges inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Journal of bacteriology · 2026
    Article
  14. Microorganisms · 2026
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sophie HelaineDepartment of Microbiology, Harvard Medical School, Boston, MA, USA. Electronic address: sophie_helaine@hms.harvard.edu.
Brian P ConlonDepartment of Microbiology and Immunology, University of North Carolina, Chapel Hill, NC, USA. Electronic address: brian_conlon@med.unc.edu.
Kimberly M DavisW. Harry Feinstone Department of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA. Electronic address: kdavi140@jhu.edu.
David G RussellDepartment of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA. Electronic address: dgr8@cornell.edu.

Funding

Systems Biology CoreU19AI162598 · NIAID · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI ALLAND, DAVID, ELLNER, JERROLD J. · 2021 to 2025
$13.9M
Lung immune function in human TB infection and its perturbation by HIV-1.R01AI155319 · NIAID · CORNELL UNIVERSITY · PI MWANDUMBA, HENRY CHARLES, RUSSELL, DAVID G · 2020 to 2024
$3.3M
Diabetes and Antibiotic Treatment FailureR01AI173004 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Brian Patrick Conlon, Lance R. Thurlow · 2023 to 2026
$2.8M
The physiological activation and consequences of Toxin-Antitoxin systems in SalmonellaR01AI155552 · NIAID · HARVARD MEDICAL SCHOOL · PI HELAINE, SOPHIE · 2021 to 2025
$2.5M
Modulation of epigenetic programming of tissue resident macrophage lineages to impact HIV-1 infection, maintenance, and persistence.R01AI176575 · NIAID · CORNELL UNIVERSITY · PI DAVID G RUSSELL · 2023 to 2026
$2.3M
Identifying the pathways associated with bacterial antibiotic persistence within host tissuesR01AI175307 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Kim Davis · 2023 to 2026
$2.3M
The contribution of respiratory burst to antibiotic failure in Staphylococcus aureus bacteremiaR56AI158511 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, BRIAN PATRICK, FOWLER, VANCE G. · 2022 to 2022
$675k
Recording the role of persisters in infection relapseR21AI168524 · NIAID · HARVARD MEDICAL SCHOOL · PI HELAINE, SOPHIE · 2023 to 2024
$466k
S. aureus virulence factor expression during kidney abscess formationR21AI159473 · NIAID · JOHNS HOPKINS UNIVERSITY · PI DAVIS, KIM · 2022 to 2023
$450k
Contribution of innate immune cells in promoting antibiotic toleranceR21AI154116 · NIAID · JOHNS HOPKINS UNIVERSITY · PI DAVIS, KIM · 2021 to 2022
$450k
NIAID NIH HHS R01 AI155319NIAID NIH HHS R01 AI155552NIAID NIH HHS R01 AI173004NIAID NIH HHS R01 AI175307NIAID NIH HHS R01 AI176575NIAID NIH HHS R21 AI154116NIAID NIH HHS R21 AI159473NIAID NIH HHS R21 AI168524NIAID NIH HHS R56 AI158511NIAID NIH HHS U19 AI162598
6 · The paper itself

Abstract

Antibiotic resistance, typically associated with genetic changes within a bacterial population, is a frequent contributor to antibiotic treatment failures. Antibiotic persistence and tolerance, which we collectively term recalcitrance, represent transient phenotypic changes in the bacterial population that prolong survival in the presence of typically lethal concentrations of antibiotics. Antibiotic recalcitrance is challenging to detect and investigate-traditionally studied under in vitro conditions, our understanding during infection and its contribution to antibiotic failure is limited. Recently, significant progress has been made in the study of antibiotic-recalcitrant populations in pathogenic species, including Mycobacterium tuberculosis, Staphylococcus aureus, Salmonella enterica, and Yersiniae, in the context of the host environment. Despite the diversity of these pathogens and infection models, shared signals and responses promote recalcitrance, and common features and vulnerabilities of persisters and tolerant bacteria have emerged. These will be discussed here, along with progress toward developing therapeutic interventions to better treat recalcitrant pathogens.

Indexed as

Anti-Bacterial AgentsBacteriaAnimalsBacterial InfectionsDrug Resistance, BacterialHost-Pathogen InteractionsHumansMycobacterium tuberculosisStaphylococcus aureusStress, PhysiologicalAnti-Bacterial Agents

Identifiers

PMID38870901
PMCPMC11446042

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.