Evidence map›Paper›PMID 38870291›Full record

ArticleScience (New York, N.Y.)2024

Integrated platform for multiscale molecular imaging and phenotyping of the human brain.

Juhyuk Park, Ji Wang, Webster Guan, Lars A Gjesteby, Dylan Pollack, Lee Kamentsky, Nicholas B Evans, Jeff Stirman, Xinyi Gu, Chuanxi Zhao and 19 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Heterogeneity of white-matter organization in the human brain.bioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. bioRxiv : the preprint server for biology · 2026
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Juhyuk Park *Institute for Medical Engineering and Science, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0002-1429-3399
Ji Wang *Institute for Medical Engineering and Science, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.
Webster Guan *Department of Chemical Engineering, MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-9115-9070
Lars A GjestebyMIT Lincoln Laboratory, Lexington, MA 02421, USA.ORCID 0000-0002-5021-7705
Dylan PollackMIT Lincoln Laboratory, Lexington, MA 02421, USA.
Lee KamentskyInstitute for Medical Engineering and Science, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0002-8161-3604
Nicholas B EvansInstitute for Medical Engineering and Science, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.
Jeff StirmanLifeCanvas Technologies, Cambridge, MA 02141, USA.
Xinyi GuDepartment of Electrical Engineering and Computer Science, MIT, Cambridge, MA 02139, USA.
Chuanxi ZhaoPicower Institute for Learning and Memory, MIT, Cambridge, MA 02139, USA.ORCID 0000-0001-9694-7132
Slayton MarxPicower Institute for Learning and Memory, MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-8209-0059
Minyoung E KimDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-8101-1259
Seo Woo ChoiDepartment of Chemical Engineering, MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-5682-3714
Michael SnyderMIT Lincoln Laboratory, Lexington, MA 02421, USA.
David ChavezMIT Lincoln Laboratory, Lexington, MA 02421, USA.
Clover Su-ArcaroPicower Institute for Learning and Memory, MIT, Cambridge, MA 02139, USA.ORCID 0000-0001-5658-5800
Yuxuan TianDepartment of Chemical Engineering, MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-0695-5743
Chang Sin ParkDepartment of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.ORCID 0000-0002-8851-7236
Qiangge ZhangMcGovern Institute for Brain Research, MIT, Cambridge, MA 02139, USA.ORCID 0000-0001-7297-0717
Dae Hee YunDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA 02139, USA.ORCID 0000-0003-2247-0081
Mira MoukheiberPicower Institute for Learning and Memory, MIT, Cambridge, MA 02139, USA.ORCID 0000-0001-8475-6048
Guoping FengDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA 02139, USA.
X William YangDepartment of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.ORCID 0000-0003-3705-7935
C Dirk KeeneDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA 98115, USA.ORCID 0000-0002-5291-1469
Patrick R HofNash Family Department of Neuroscience, Center for Discovery and Innovation, and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10019, USA.ORCID 0000-0002-3208-1154
Satrajit S GhoshDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-5312-6729
Matthew P FroschC. S. Kubik Laboratory for Neuropathology, Massachusetts General Hospital and Harvard Medical School, Boston, MA 02114, USA.ORCID 0000-0002-3940-9861
Laura J BrattainMIT Lincoln Laboratory, Lexington, MA 02421, USA.
Kwanghun ChungInstitute for Medical Engineering and Science, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.ORCID 0000-0002-8167-3340

Funding

THE ROLE OF ADVANCED CAA IN ALZHEIMER'S DEMENTIAP50AG005134 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI HYMAN, BRADLEY T. · 1985 to 2018
$42.1M
University of Washington Alzheimer's Disease Research CenterP30AG066509 · NIA · UNIVERSITY OF WASHINGTON · PI Amanda D. Boyd · 2020 to 2026
$29.0M
DANDI: Distributed Archives for Neurophysiology Data IntegrationR24MH117295 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Satrajit Sujit Ghosh, Yaroslav O Halchenko · 2019 to 2026
$11.6M
Towards integrated 3D reconstruction of whole human brains at subcellular resolutionU01MH117072 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHUNG, KWANGHUN · 2018 to 2022
$8.8M
Highly specific, renewable, and cost-effective antibody toolbox for 3D proteomic phenotyping of the brainRF1MH121270 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHUNG, KWANGHUN, EICHINGER, DANIEL J · 2019 to 2019
$4.5M
Next-generation MORF Mice for Scalable Brainwide Morphological Mapping and Genetic Perturbation of Single NeuronsRF1MH128888 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DONG, HONG-WEI, YANG, XIANGDONG WILLIAM · 2021 to 2021
$4.4M
Proteome-Driven Holistic Reconstruction of Organ-Wide Multi-Scale NetworksDP2ES027992 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHUNG, KWANGHUN · 2016 to 2021
$2.8M
NIA NIH HHS P30 AG066509NIA NIH HHS P50 AG005134NIEHS NIH HHS DP2 ES027992NIMH NIH HHS R24 MH117295NIMH NIH HHS RF1 MH121270NIMH NIH HHS RF1 MH128888NIMH NIH HHS U01 MH117072
6 · The paper itself

Abstract

Understanding cellular architectures and their connectivity is essential for interrogating system function and dysfunction. However, we lack technologies for mapping the multiscale details of individual cells and their connectivity in the human organ-scale system. We developed a platform that simultaneously extracts spatial, molecular, morphological, and connectivity information of individual cells from the same human brain. The platform includes three core elements: a vibrating microtome for ultraprecision slicing of large-scale tissues without losing cellular connectivity (MEGAtome), a polymer hydrogel-based tissue processing technology for multiplexed multiscale imaging of human organ-scale tissues (mELAST), and a computational pipeline for reconstructing three-dimensional connectivity across multiple brain slabs (UNSLICE). We applied this platform for analyzing human Alzheimer's disease pathology at multiple scales and demonstrating scalable neural connectivity mapping in the human brain.

Indexed as

Alzheimer DiseaseBrainMolecular ImagingConnectomeHumansHydrogelsPhenotypeHydrogels

Identifiers

PMID38870291
PMCPMC11830150

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.