Evidence map›Paper›PMID 38869803›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Generating Mutant for a Stress-Responsive Gene in Rice Using CRISPR-Cas9 System.

Chudamani Sharma Prakash, Ramanjulu Sunkar

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Chudamani Sharma PrakashDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK, USA.
Ramanjulu SunkarDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK, USA. ramanjulu.sunkar@okstate.edu.

Funding

NSF-EPSCoR RII Track 2 FEC—1826836NSF Grant IOS-1849708
6 · The paper itself

Abstract

CRISPR/Cas9 system is one of the most often utilized engineering tools for genome editing in many organisms including crop plants and presents great value in both basic and applied research. This is a preferred method because of its relative simplicity, cost-effectiveness, and reliability. The Cas9 nuclease guided by a short single guide RNA (gRNA) can generate double-strand DNA breaks (DSB) at the specific sites in chromosomal DNA. The DSB site is repaired by error-prone repair methods. During repair, some nucleotides are deleted or added at the target site. Here, we present a simplified protocol for generating mutants in gene of interest in rice using CRISPR/Cas9.

Indexed as

CRISPR-Cas SystemsGene EditingOryzaRNA, Guide, CRISPR-Cas SystemsDNA Breaks, Double-StrandedMutationPlants, Genetically ModifiedStress, PhysiologicalRNA, Guide, CRISPR-Cas SystemsAgrobacteriumCas9Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)MutationTransformation

Identifiers

PMID38869803

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.