ArticleiMeta2022
A painless way to customize Circos plot: From data preparation to visualization using TBtools.
Article in iMeta, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
79 citing papers in PubMed.
- A chromosome-level genome assembly of the endangered rose Rosa anemoniflora.Scientific data · 2026Article
- Genome-Wide Identification and Characterization of Chemosensory Gene Families in the MayflyGenes · 2026Article
- Genome-Wide Identification and Expression Analysis ofBiology · 2026Article
- A CaPlants (Basel, Switzerland) · 2026Article
- Assembling telomere-to-telomere genomes of Fusarium oxysporum f. sp. lactucae provides a roadmap for studying genome and phenotype evolution.BMC genomics · 2026Article
- Genome-wide identification of the GRF gene family and response to cold stress in astragalus (Astragalus membranaceus).BMC genomics · 2026Article
- Genomic and pathogenic characterization of Listeria ivanovii subsp. londoniensis from ovine farms in China.BMC veterinary research · 2026Article
- Stage-specific GWAS identifies a pleiotropic ankyrin repeat locus near GmSALT3 for salinity tolerance in soybean.Plant cell reports · 2026Article
- Identification and characterization of U-box E3 ubiquitin ligase genes (ChPUBs) in Cardamine hupingshanensis under abiotic stress.BMC genomics · 2026Article
- Biocontrol potential and molecular basis of predation in a marine raptorial ciliate.The ISME journal · 2026Article
- Identification and characterization of GRAS transcription factors inFrontiers in plant science · 2026Article
- Deciphering the role of receptor-like kinases in the adaptation ofFrontiers in plant science · 2026Article
- Genome-wide identification and expression analysis of the SHAGGY-like kinase gene family in foxtail millet (Frontiers in plant science · 2026Article
- In-silico identification, characterization and expression analysis of salt overly sensitive-2 (SOS2) gene family in Gossypium hirsutum L. against abiotic stresses.Scientific reports · 2025Article
- Comparative Study of Fatty Acid Desaturase (FAD) Members Reveals Their Differential Roles in Upland Cotton.Plants (Basel, Switzerland) · 2025Article
- Genome-wide analysis of soybean MLPs reveals evolutionary and structural insights into drought, salt stress and ABA responses.BMC plant biology · 2025Article
- A comprehensive analysis to speculate the role of trithorax genes in photoperiod-mediated tuberization in potato and comparison with storage root crops.BMC plant biology · 2025Article
- Characterization of Endoglucanase (GH9) Gene Family in Tomato and Its Expression in Response toPlants (Basel, Switzerland) · 2025Article
- Assembling the chromosome-level genome of Arctium Lappa L. provides new insights into carotenoid biosynthesis.BMC plant biology · 2025Article
- Genome-wide analysis of the Alba gene family members in soybean (Glycine max L.): characterization and stress-responsive expression patterns.BMC plant biology · 2025Article
19 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Circos plots enable scientists to easily inspect big biological data genome-widely on a macroscopic scale, but cumbersome preparation of input data and complex parameter configuration limits its application. We have developed the "Advanced Circos" function in TBtools, to provide a simple way to construct Circos plots. As an out-of-the-box combo toolkit, TBtools has integrated a set of functions convenient for input data preparation. The "Advanced Circos" function is supplied with a user-friendly interface for the customization of parameter settings and can be deployed to visualize all kinds of genomic data, such as genomic associations, alignment data, gene density, and QTL locations. In the present article, we introduce the main features of "Advance Circos" and the protocols of upstream data preparation, aiming to endow more users with the ability to use Circos plots in big genomic data exploration.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.