ArticleiMeta2023
A guide for comparing microbial co-occurrence networks.
Article in iMeta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
45 citing papers in PubMed.
- The survival and cecal microbiota profile of broilers subjected to acute heat stress are contingent upon their body weight.Poultry science · 2026Article
- Structural and Functional Responses of Root Endophytic Fungi to Fairy Ring Expansion in Alpine Meadows on the Tibetan Plateau.Ecology and evolution · 2026Article
- Contrasting the Microbial Communities in Rhizosphere and Bulk Soils Across DifferentMicroorganisms · 2026Article
- Microbial co-occurrence patterns and community assembly in seamount sediment cores: disentangling the effects of assembly processes on β-diversity.Applied and environmental microbiology · 2026Article
- Tracking Gut Homeostasis: Key Taxa Transitions and Core Network Hyper-Connectivity as Early Signals of Dysbiosis.Biomedicines · 2026Article
- Article
- Spatial Patterns and Ecological Drivers of Sedimentary Eukaryotic Microorganisms Across Typical Depositional Zones of Lake Taihu.Microorganisms · 2026Article
- Wheat Rhizosphere Bacterial Community Response to Bromus tectorum (L.) and Fusarium pseudograminearum Crown Rot.Microbial ecology · 2026Article
- Differential responses of termite gut bacterial and fungal community to tropical forest conversion.Communications biology · 2026Article
- A workflow for statistical analysis and visualization of microbiome omics data using the R microeco package.Nature protocols · 2026Review
- The bacteria of a fig community.Microbiology spectrum · 2026Article
- Microbial interactions mediate the fairy ring type effects on alpine meadow plant communities on the Tibetan plateau.Environmental microbiome · 2026Article
- Land-use types shape soil bacterial communities, co-occurrence networks, and predicted functions in karst ecosystems.Scientific reports · 2026Article
- Plant diversity induces shifts from microbial generalists to specialist by enhancing niche differentiation, microbiome connectivity, and network stability in a temperate grassland.Environmental microbiome · 2026Article
- Stochasticity Prevails but Differs: Tissue-Specific Assembly of Gut Microbiomes Across Seasons in an Amphibian Model.Ecology and evolution · 2026Article
- Gut microbiome dynamics and cardiometabolic disease progression: evidence from a secondary data analysis of pooled clinical datasets.Frontiers in microbiology · 2026Article
- Continuous cropping of lavender (Frontiers in plant science · 2026Article
- Root-associated bacterial and fungal communities of the endangered páramo bromeliad Puya goudotiana.PloS one · 2026Article
- Shifted microbial network characteristics govern soil NFrontiers in microbiology · 2026Article
- Advancing the study of microbial symbionts of amphibians and reptiles.Frontiers in amphibian and reptile science · 2026Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The article provides a pipeline for comparing microbial co-occurrence networks based on the R microeco package and meconetcomp package. It has high flexibility and expansibility and can help users efficiently compare networks built from different groups of samples or different construction approaches.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.