Evidence map›Paper›PMID 38867895›Full record

ArticleiMeta2022

Targeting keystone species helps restore the dysbiosis of butyrate-producing bacteria in nonalcoholic fatty liver disease.

Dingfeng Wu, Lei Liu, Na Jiao, Yida Zhang, Li Yang, Chuan Tian, Ping Lan, Lixin Zhu, Rohit Loomba, Ruixin Zhu

Abstract read
In one paragraph

Article in iMeta, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
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  6. [Analysis of the Characteristics of the Oral Virome in Metabolic Dysfunction-Associated Fatty Liver Disease].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2026
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  8. SupragingivalJournal of oral microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Dingfeng WuNational Clinical Research Center for Child Health, The Children's Hospital Zhejiang University School of Medicine Hangzhou Zhejiang People's Republic of China.ORCID 0000-0002-9287-122X
Lei LiuThe Shanghai Tenth People's Hospital, School of Life Sciences and Technology Tongji University Shanghai People's Republic of China.
Na JiaoNational Clinical Research Center for Child Health, The Children's Hospital Zhejiang University School of Medicine Hangzhou Zhejiang People's Republic of China.
Yida ZhangDepartment of Biomedical Informatics Harvard Medical School Boston Massachusetts USA.
Li YangState Key Laboratory of Biotherapy, West China Hospital Sichuan University and Collaborative Innovation Center Chengdu Sichuan People's Republic of China.
Chuan TianThe Shanghai Tenth People's Hospital, School of Life Sciences and Technology Tongji University Shanghai People's Republic of China.
Ping LanGuangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Guangdong Institute of Gastroenterology Sun Yat-sen University Guangzhou People's Republic of China.
Lixin ZhuGuangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Guangdong Institute of Gastroenterology Sun Yat-sen University Guangzhou People's Republic of China.
Rohit LoombaDepartment of Medicine, Division of Gastroenterology and Epidemiology, NAFLD Research Center University of California San Diego La Jolla California USA.
Ruixin ZhuThe Shanghai Tenth People's Hospital, School of Life Sciences and Technology Tongji University Shanghai People's Republic of China.

Funding

UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
Yeast Genetics and Stress Response Genes-BiomedicalP42ES010337 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TUKEY, ROBERT H · 2000 to 2022
$69.8M
QUS Technology for Diagnosis and Grading of Hepatic Steatosis in NAFLDR01DK106419 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LOOMBA, ROHIT, SIRLIN, CLAUDE B · 2015 to 2019
$3.4M
NCATS NIH HHS UL1 TR001442NIDDK NIH HHS R01 DK106419NIEHS NIH HHS P42 ES010337
6 · The paper itself

Abstract

The dysbiosis of the gut microbiome is one of the pathogenic factors of nonalcoholic fatty liver disease (NAFLD) and also affects the treatment and intervention of NAFLD. Among gut microbiomes, keystone species that regulate the integrity and stability of an ecological community have become the potential intervention targets for NAFLD. Here, we collected stool samples from 22 patients with nonalcoholic steatohepatitis (NASH), 25 obese patients, and 16 healthy individuals from New York for 16S rRNA gene sequencing. An algorithm was implemented to identify keystone species based on causal inference theories and dynamic intervention simulation. External validation was performed in an independent cohort from California. Eight keystone species in the gut of NAFLD, represented by

Indexed as

causal inferencedynamic intervention simulationgut microbiotakeystone speciesnonalcoholic fatty liver disease

Identifiers

PMID38867895
PMCPMC10989787

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.