Evidence map›Paper›PMID 38867766›Full record

ArticleIn silico pharmacology2024

Exploring gene network and protein interaction analysis of neurotrophin signaling pathway in ameloblastoma.

Sidhra Syed Zameer Ahmed, Manimaran Vetrivel, Syed Zameer Ahmed Khader, Yoithapprabhunath Thuckanaickenpalayam Ragunathan, SriChinthu Kenniyan Kumar, Puniethaa Prabhu, Dharani Lakshmi Devi Rajaram

Abstract read
In one paragraph

Article in In silico pharmacology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sidhra Syed Zameer AhmedDepartment of Biotechnology, K. S. Rangasamy College of Technology, K. S. R. Kalvinagar, Tiruchengode, Tamil Nadu 637 215 India.
Manimaran VetrivelDepartment of Biotechnology, K. S. Rangasamy College of Technology, K. S. R. Kalvinagar, Tiruchengode, Tamil Nadu 637 215 India.
Syed Zameer Ahmed KhaderDepartment of Biotechnology, K. S. Rangasamy College of Technology, K. S. R. Kalvinagar, Tiruchengode, Tamil Nadu 637 215 India.
Yoithapprabhunath Thuckanaickenpalayam RagunathanDepartment of Oral & Maxillofacial Pathology and Microbiology, Vivekanandha Dental College for Women, Tiruchengode, Tamil Nadu India.
SriChinthu Kenniyan KumarDepartment of Oral & Maxillofacial Pathology and Microbiology, K. S. R. Institute of Dental Science and Research, Tiruchengode, Tamil Nadu India.
Puniethaa PrabhuDepartment of Biotechnology, K. S. Rangasamy College of Technology, K. S. R. Kalvinagar, Tiruchengode, Tamil Nadu 637 215 India.
Dharani Lakshmi Devi RajaramDepartment of Biotechnology, K. S. Rangasamy College of Technology, K. S. R. Kalvinagar, Tiruchengode, Tamil Nadu 637 215 India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ameloblastoma is a non-cancerous but aggressive oral tumor emerging from odontogenic epithelial tissue involved during odontogenesis. Since there is lack in unravelling the complete molecular pathogenesis of ameloblastoma, chemotherapy is less attempted and a lot of disagreement over the optimal treatment option. Hence, till date, wide surgical resection is considered to be the reliable treatment for ameloblastoma. The Neurotrophin Signaling pathway plays an important role in neuron signaling and it is closely related with the MAPK pathway, which on the other hand regulated cell differentiation, apoptosis, proliferation, plasticity and survival. Protein- Protein Interaction analysis was analysed with STRING tool using WNL value, identified that CTNNB1, HRAS, NGFR, NGFR, and SORT1 having high interacting with BDNF, NT4, p75NTR, NGF, and NT3. The results of ontology analysis revealed that Neurotrophin signaling pathway is associated with Cell surface receptor signaling pathway, regulation of cell differentiation, regulation of development process, EGFR tyrosine kinase inhibitor resistance, MAPK signaling pathway, PI3K-Akt signaling pathway and Ras signaling pathway leading to pathogenesis involving genes. Further, clustering coefficient values of proteins BDNF, NT4, p75NTR, NGF & NT3 were identified as 0.627, 0.708, 0.367, 0.644 & 0.415 Supplementary Information: The online version contains supplementary material available at 10.1007/s40203-024-00223-2.

Indexed as

AmeloblastomaEnrichment ontology analysisLeader genesMolecular dockingNeurotrophinOdontogenesisTopology analysis

Identifiers

PMID38867766
PMCPMC11164846

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