Evidence map›Paper›PMID 38867239›Full record

ArticleBMC biology2024

A distinct dimer configuration of a diatom Get3 forming a tetrameric complex with its tail-anchored membrane cargo.

Chi-Chih Chen, Yu-Ru Huang, Yuen Ting Chan, Hung-Yun Lin, Han-Jia Lin, Chwan-Deng Hsiao, Tzu-Ping Ko, Tai-Wen Lin, Ya-Hsuan Lan, Hsuan-Ya Lin and 1 more

Abstract read
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Article in BMC biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chi-Chih Chen *Department of Life Sciences and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Beitou Dist, No. 155, Sec. 2, Linong St, Taipei City, 112304, Taiwan.
Yu-Ru Huang *Department of Life Sciences and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Beitou Dist, No. 155, Sec. 2, Linong St, Taipei City, 112304, Taiwan.
Yuen Ting ChanDepartment of Life Sciences and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Beitou Dist, No. 155, Sec. 2, Linong St, Taipei City, 112304, Taiwan.
Hung-Yun LinCenter of Excellence for the Oceans, National Taiwan Ocean University, Keelung, Taiwan.
Han-Jia LinDepartment of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung City, Taiwan.
Chwan-Deng HsiaoInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Tzu-Ping KoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Tai-Wen LinInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Ya-Hsuan LanDepartment of Life Sciences and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Beitou Dist, No. 155, Sec. 2, Linong St, Taipei City, 112304, Taiwan.
Hsuan-Ya LinDepartment of Life Sciences and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Beitou Dist, No. 155, Sec. 2, Linong St, Taipei City, 112304, Taiwan.
Hsin-Yang Chang *Department of Life Sciences and Institute of Genome Sciences, National Yang Ming Chiao Tung University, Beitou Dist, No. 155, Sec. 2, Linong St, Taipei City, 112304, Taiwan. hychang5@nycu.edu.tw.ORCID http://orcid.org/0000-0001-6139-4937

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMost tail-anchored (TA) membrane proteins are delivered to the endoplasmic reticulum through a conserved posttranslational pathway. Although core mechanisms underlying the targeting and insertion of TA proteins are well established in eukaryotes, their role in mediating TA protein biogenesis in plants remains unclear. We reported the crystal structures of algal arsenite transporter 1 (ArsA1), which possesses an approximately 80-kDa monomeric architecture and carries chloroplast-localized TA proteins. However, the mechanistic basis of ArsA2, a Get3 (guided entry of TA proteins 3) homolog in plants, for TA recognition remains unknown.

resultsHere, for the first time, we present the crystal structures of the diatom Pt-Get3a that forms a distinct ellipsoid-shaped tetramer in the open (nucleotide-bound) state through crystal packing. Pulldown assay results revealed that only tetrameric Pt-Get3a can bind to TA proteins. The lack of the conserved zinc-coordination CXXC motif in Pt-Get3a potentially leads to the spontaneous formation of a distinct parallelogram-shaped dimeric conformation in solution, suggesting a new dimer state for subsequent tetramerization upon TA targeting. Pt-Get3a nonspecifically binds to different subsets of TA substrates due to the lower hydrophobicity of its α-helical subdomain, which is implicated in TA recognition.

conclusionsOur study provides new insights into the mechanisms underlying TA protein shielding by tetrameric Get3 during targeting to the diatom's cell membrane.

Indexed as

DiatomsMembrane ProteinsProtein MultimerizationMembrane ProteinsArsAGet3Posttranslational pathwayTail-anchored membrane proteinTRC40

Identifiers

PMID38867239
PMCPMC11170914

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