Evidence map›Paper›PMID 38867059›Full record

ArticleNature aging2024

Conserved epigenetic hallmarks of T cell aging during immunity and malignancy.

Tian Mi, Andrew G Soerens, Shanta Alli, Tae Gun Kang, Anoop Babu Vasandan, Zhaoming Wang, Vaiva Vezys, Shunsuke Kimura, Ilaria Iacobucci, Stephen B Baylin and 8 more

Abstract read
In one paragraph

Article in Nature aging, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
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  5. Article
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  7. Article
  8. Article
  9. The diversity of CD8Nature reviews. Immunology · 2025
    Review
  10. Review
  11. Aging and immunity: the age-old tango.Genes & development · 2025
    Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Tian MiDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-6446-1995
Andrew G SoerensCenter for Immunology, Department of Microbiology and Immunology, University of Minnesota, Minneapolis, MN, USA.ORCID http://orcid.org/0000-0001-7291-8433
Shanta AlliDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Tae Gun KangDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Anoop Babu VasandanDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0003-4043-2468
Zhaoming WangDepartment of Computational Biology and Department of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0001-7556-3869
Vaiva VezysCenter for Immunology, Department of Microbiology and Immunology, University of Minnesota, Minneapolis, MN, USA.ORCID http://orcid.org/0000-0002-2520-809X
Shunsuke KimuraDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-2158-467X
Ilaria IacobucciDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0003-2008-1365
Stephen B BaylinThe Sidney Kimmel Comprehensive Cancer Institute, The Johns Hopkins Hospital, Baltimore, MD, USA.ORCID http://orcid.org/0000-0003-3697-3798
Peter A JonesDepartment of Epigenetics, Van Andel Institute, Grand Rapids, MI, USA.ORCID http://orcid.org/0000-0001-8309-4767
Christopher HinerDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York, NY, USA.
April MuellerDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-2134-5134
Harris GoldsteinDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, New York, NY, USA.
Charles G MullighanDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-1871-1850
Caitlin C ZebleyDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA. caitlin.zebley@stjude.org.ORCID http://orcid.org/0000-0002-8419-4660
David MasopustCenter for Immunology, Department of Microbiology and Immunology, University of Minnesota, Minneapolis, MN, USA. masopust@umn.edu.ORCID http://orcid.org/0000-0002-9440-3884
Ben YoungbloodDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, USA. benjamin.youngblood@stjude.org.ORCID http://orcid.org/0000-0002-1261-9957

Funding

Household Respiratory Virus SARS-CoV-2 Transmission and Immunity Sub-Study (HRTS)U01AI144616 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI GORDON, AUBREE L, THOMAS, PAUL G. · 2019 to 2025
$43.7M
Targeting DNA Methylation and the Cancer EpigenomeR35CA209859 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI PETER A JONES · 2017 to 2026
$11.9M
Mucosal T Cell Memory to PathogensR01AI084913 · NIAID · UNIVERSITY OF MINNESOTA · PI MASOPUST, DAVID · 2010 to 2023
$5.8M
Amplifying and Redirecting CMV-specific CD8 T cells to provide sustained control of HIV infectionR01AI172607 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI ALMO, STEVEN C., GOLDSTEIN, HARRIS · 2022 to 2025
$4.4M
Novel Biologics Designed to Mobilize HIV-specific CTL for Sustained HIV RemissionR01AI145024 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI ALMO, STEVEN C., GOLDSTEIN, HARRIS · 2019 to 2023
$4.1M
Resident Memory T CellsR01AI146032 · NIAID · UNIVERSITY OF MINNESOTA · PI DAVID MASOPUST · 2020 to 2026
$3.8M
EPIGENETIC REPROGRAMMING OF T CELL EXHAUSTION TO ENHANCE TUMOR IMMUNOTHERAPYR01CA237311 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Benjamin Alan Youngblood · 2020 to 2026
$2.9M
Repurposing TRM for tumor immunotherapyR01CA238439 · NCI · UNIVERSITY OF MINNESOTA · PI MASOPUST, DAVID · 2020 to 2024
$2.5M
Epigenetic Regulation of T-cell Exhaustion During Treated Chronic HIV InfectionR01AI114442 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI YOUNGBLOOD, BENJAMIN ALAN · 2015 to 2019
$2.1M
Mucosal T cell memory to pathogensR37AI084913 · NIAID · UNIVERSITY OF MINNESOTA · PI DAVID MASOPUST · 2024 to 2026
$1.7M
Decoding the epigenetic landscape that delineates T cell homeostatic proliferation from uncontrolled growth”K08CA279926 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Caitlin Zebley · 2023 to 2026
$791k
NCI NIH HHS K08 CA279926NCI NIH HHS R01 CA237311NCI NIH HHS R01 CA238439NCI NIH HHS R35 CA209859NIAID NIH HHS R01 AI084913NIAID NIH HHS R01 AI114442NIAID NIH HHS R01 AI145024NIAID NIH HHS R01 AI146032NIAID NIH HHS R01 AI172607NIAID NIH HHS R37 AI084913NIAID NIH HHS U01 AI144616U.S. Department of Health & Human Services | National Institutes of Health (NIH) AI146032U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA238439U.S. Department of Health & Human Services | National Institutes of Health (NIH) K08CA279926U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01AI145024U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01AI172607U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01CA237311U.S. Department of Health & Human Services | National Institutes of Health (NIH) U01AI144616
6 · The paper itself

Abstract

Chronological aging correlates with epigenetic modifications at specific loci, calibrated to species lifespan. Such 'epigenetic clocks' appear conserved among mammals, but whether they are cell autonomous and restricted by maximal organismal lifespan remains unknown. We used a multilifetime murine model of repeat vaccination and memory T cell transplantation to test whether epigenetic aging tracks with cellular replication and if such clocks continue 'counting' beyond species lifespan. Here we found that memory T cell epigenetic clocks tick independently of host age and continue through four lifetimes. Instead of recording chronological time, T cells recorded proliferative experience through modification of cell cycle regulatory genes. Applying this epigenetic profile across a range of human T cell contexts, we found that naive T cells appeared 'young' regardless of organism age, while in pediatric patients, T cell acute lymphoblastic leukemia appeared to have epigenetically aged for up to 200 years. Thus, T cell epigenetic clocks measure replicative history and can continue to accumulate well-beyond organismal lifespan.

Indexed as

Cellular SenescenceEpigenesis, GeneticAgingAnimalsHumansMaleMemory T CellsMiceMice, Inbred C57BLPrecursor T-Cell Lymphoblastic Leukemia-LymphomaT-Cell SenescenceT-Lymphocytes

Identifiers

PMID38867059
PMCPMC11333289

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.