Evidence map›Paper›PMID 38866910›Full record

ArticleExperimental & molecular medicine2024

The identification of effective tumor-suppressing neoantigens using a tumor-reactive TIL TCR-pMHC ternary complex.

Sang Hoon Kim, Bo Ryeong Lee, Sung-Min Kim, Sungsik Kim, Min-Seok Kim, Jaehyun Kim, Inkyu Lee, Hee-Soo Kim, Gi-Hoon Nam, In-San Kim and 4 more

Abstract read
In one paragraph

Article in Experimental & molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Sang Hoon Kim *Geninus Inc., Seoul, 05836, Korea.
Bo Ryeong Lee *Geninus Inc., Seoul, 05836, Korea.
Sung-Min Kim *Geninus Inc., Seoul, 05836, Korea.ORCID http://orcid.org/0000-0001-7937-4547
Sungsik KimGeninus Inc., Seoul, 05836, Korea.
Min-Seok KimGeninus Inc., Seoul, 05836, Korea.
Jaehyun KimDepartment of Research and Development, SHIFTBIO Inc., Seoul, 02751, Korea.
Inkyu LeeDepartment of Research and Development, SHIFTBIO Inc., Seoul, 02751, Korea.
Hee-Soo KimGeninus Inc., Seoul, 05836, Korea.
Gi-Hoon NamDepartment of Research and Development, SHIFTBIO Inc., Seoul, 02751, Korea.
In-San KimKU-KIST Graduate School of Converging Science and Technology, Korea University, Seoul, 02841, Korea.
Kyuyoung SongGeninus Inc., Seoul, 05836, Korea.
Yoonjoo ChoiCombinatorial Tumor Immunotherapy MRC, Chonnam National University Medical School, Hwasun-gun, Jeollanam-do, 58128, Korea. kalikuta@gmail.com.
Dong-Sup LeeDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea. dlee5522@snu.ac.kr.ORCID http://orcid.org/0000-0001-8312-2705
Woong-Yang ParkGeninus Inc., Seoul, 05836, Korea. woongyang.park@kr-geninus.com.

Funding

Korea Health Industry Development Institute (KHIDI) HV22C0228National Research Foundation of Korea (NRF) 2017M3A9A7050803National Research Foundation of Korea (NRF) NRF-2020M3A9G3080281National Research Foundation of Korea (NRF) NRF-2021R1A2C1011920National Research Foundation of Korea (NRF) NRF-2021R1F1A1063769
6 · The paper itself

Abstract

Neoantigens are ideal targets for cancer immunotherapy because they are expressed de novo in tumor tissue but not in healthy tissue and are therefore recognized as foreign by the immune system. Advances in next-generation sequencing and bioinformatics technologies have enabled the quick identification and prediction of tumor-specific neoantigens; however, only a small fraction of predicted neoantigens are immunogenic. To improve the predictability of immunogenic neoantigens, we developed the in silico neoantigen prediction workflows VACINUS

Indexed as

Antigens, NeoplasmLymphocytes, Tumor-InfiltratingReceptors, Antigen, T-CellAnimalsCarcinoma, HepatocellularCD8-Positive T-LymphocytesCell Line, TumorFemaleHumansImmunotherapyLiver NeoplasmsMajor Histocompatibility ComplexMelanoma, ExperimentalMiceAntigens, NeoplasmReceptors, Antigen, T-Cell

Identifiers

PMID38866910
PMCPMC11263684

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.