Evidence map›Paper›PMID 38866016›Full record

ArticleCell reports. Medicine2024

Spatial transcriptomics analysis identifies a tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.

Hasan Alhaddad, Oscar E Ospina, Mariam Lotfy Khaled, Yuan Ren, Ethan Vallebuona, Mohammad Baraa Boozo, Peter A Forsyth, Yolanda Pina, Robert Macaulay, Vincent Law and 4 more

Abstract read
In one paragraph

Article in Cell reports. Medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Hasan AlhaddadDepartment of Metabolism and Physiology, Moffitt Cancer Center, Tampa, FL, USA.
Oscar E OspinaDepartment of Biostatistics and Bioinformatics at the Moffitt Cancer Center, Tampa, FL, USA.
Mariam Lotfy KhaledDepartment of Metabolism and Physiology, Moffitt Cancer Center, Tampa, FL, USA; Department of Biochemistry, Faculty of Pharmacy, Cairo University, Cairo, Egypt.
Yuan RenDepartment of Metabolism and Physiology, Moffitt Cancer Center, Tampa, FL, USA.
Ethan VallebuonaDepartment of Metabolism and Physiology, Moffitt Cancer Center, Tampa, FL, USA; Cancer Biology Ph.D. Program, University of South Florida, Tampa, FL, USA.
Mohammad Baraa BoozoDepartment of Metabolism and Physiology, Moffitt Cancer Center, Tampa, FL, USA.
Peter A ForsythDepartment of Tumor Biology, Moffitt Cancer Center, Tampa, FL, USA; Department of NeuroOncology, Moffitt Cancer Center, Tampa, FL, USA.
Yolanda PinaDepartment of NeuroOncology, Moffitt Cancer Center, Tampa, FL, USA.
Robert MacaulayDepartment of Pathology, Moffitt Cancer Center, Tampa, FL, USA.
Vincent LawDepartment of Tumor Biology, Moffitt Cancer Center, Tampa, FL, USA; Department of NeuroOncology, Moffitt Cancer Center, Tampa, FL, USA.
Kenneth Y TsaiDepartment of Pathology, Moffitt Cancer Center, Tampa, FL, USA.
W Douglas CressDepartment of Molecular Oncology at the Moffitt Cancer Center, Tampa, FL, USA.
Brooke FridleyDepartment of Biostatistics and Bioinformatics at the Moffitt Cancer Center, Tampa, FL, USA; Division of Health Services & Outcomes Research, Children's Mercy Hospital, Kansas City, MO 64108, USA. Electronic address: blfridley@cmh.edu.
Inna SmalleyDepartment of Metabolism and Physiology, Moffitt Cancer Center, Tampa, FL, USA; Department of Cutaneous Oncology at the Moffitt Cancer Center, Tampa, FL, USA. Electronic address: inna.smalley@moffitt.org.

Funding

Integrated Program in Cancer and Data Science (ICADS)T32CA233399 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI William Douglas Cress, Elsa R Flores · 2019 to 2026
$1.7M
Analytical tools for studying the tumor microenvironment leveraging spatial transcriptomicsU01CA274489 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI FRIDLEY, BROOKE L, YU, XIAOQING · 2022 to 2024
$1.2M
Defining the Role of Metabolic Heterogeneity in Melanoma Dissemination and Therapy EscapeR00CA226679 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI SMALLEY, INNA · 2020 to 2022
$747k
NCI NIH HHS R00 CA226679NCI NIH HHS T32 CA233399NCI NIH HHS U01 CA274489
6 · The paper itself

Abstract

Leptomeningeal disease (LMD) remains a rapidly lethal complication for late-stage melanoma patients. Here, we characterize the tumor microenvironment of LMD and patient-matched extra-cranial metastases using spatial transcriptomics in a small number of clinical specimens (nine tissues from two patients) with extensive in vitro and in vivo validation. The spatial landscape of melanoma LMD is characterized by a lack of immune infiltration and instead exhibits a higher level of stromal involvement. The tumor-stroma interactions at the leptomeninges activate tumor-promoting signaling, mediated through upregulation of SERPINA3. The meningeal stroma is required for melanoma cells to survive in the cerebrospinal fluid (CSF) and promotes MAPK inhibitor resistance. Knocking down SERPINA3 or inhibiting the downstream IGR1R/PI3K/AKT axis results in tumor cell death and re-sensitization to MAPK-targeting therapy. Our data provide a spatial atlas of melanoma LMD, identify the tumor-promoting role of meningeal stroma, and demonstrate a mechanism for overcoming microenvironment-mediated drug resistance in LMD.

Indexed as

MelanomaMeningeal NeoplasmsStromal CellsTumor MicroenvironmentAnimalsCell Line, TumorDrug Resistance, NeoplasmFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMeningesMiceSignal TransductionTranscriptomebraincentral nervous system metastasisCSFdrug resistanceleptomeningeal diseaseleptomeningesMAPK therapymelanomametastasispia

Identifiers

PMID38866016
PMCPMC11228800

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.