Evidence map›Paper›PMID 38865090›Full record

ArticleThe Journal of cell biology2024

DBF4, not DRF1, is the crucial regulator of CDC7 kinase at replication forks.

Anja Göder, Chrystelle Antoinat Maric, Michael D Rainey, Aisling O'Connor, Chiara Cazzaniga, Daniel Shamavu, Jean-Charles Cadoret, Corrado Santocanale

Abstract read
In one paragraph

Article in The Journal of cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anja GöderCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway , Galway, Ireland.ORCID 0000-0001-9743-1656
Chrystelle Antoinat MaricUniversité Paris Cité, CNRS, Institut Jacques Monod , Paris, France.ORCID 0000-0002-6735-1441
Michael D RaineyCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway , Galway, Ireland.ORCID 0000-0001-9777-873X
Aisling O'ConnorCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway , Galway, Ireland.ORCID 0000-0001-5584-2959
Chiara CazzanigaCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway , Galway, Ireland.ORCID 0000-0002-7693-9167
Daniel ShamavuCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway , Galway, Ireland.ORCID 0000-0003-3806-036X
Jean-Charles CadoretUniversité Paris Cité, CNRS, Institut Jacques Monod , Paris, France.ORCID 0000-0002-3827-5208
Corrado SantocanaleCentre for Chromosome Biology, School of Biological and Chemical Sciences, University of Galway , Galway, Ireland.ORCID 0000-0003-1337-5656

Funding

GEFLUCIdEx Université de Paris ANR-18-IDEX-0001Institut National du Cancer INCa-10493Irish Research Council Scholarship GOIPG/2022/896Irish Research eLibraryLa Ligue Nationale Contre le Cancer RS16/75-108Science Foundation Ireland 16/IA/4476Suzanne Larzat
6 · The paper itself

Abstract

CDC7 kinase is crucial for DNA replication initiation and is involved in fork processing and replication stress response. Human CDC7 requires the binding of either DBF4 or DRF1 for its activity. However, it is unclear whether the two regulatory subunits target CDC7 to a specific set of substrates, thus having different biological functions, or if they act redundantly. Using genome editing technology, we generated isogenic cell lines deficient in either DBF4 or DRF1: these cells are viable but present signs of genomic instability, indicating that both can independently support CDC7 for bulk DNA replication. Nonetheless, DBF4-deficient cells show altered replication efficiency, partial deficiency in MCM helicase phosphorylation, and alterations in the replication timing of discrete genomic regions. Notably, we find that CDC7 function at replication forks is entirely dependent on DBF4 and not on DRF1. Thus, DBF4 is the primary regulator of CDC7 activity, mediating most of its functions in unperturbed DNA replication and upon replication interference.

Indexed as

Cell Cycle ProteinsDNA ReplicationProtein Serine-Threonine KinasesAdaptor Proteins, Signal TransducingDNA-Binding ProteinsGenomic InstabilityHumansPhosphorylationAdaptor Proteins, Signal TransducingCDC7 protein, humanCell Cycle ProteinsDBF4 protein, humanDNA-Binding ProteinsProtein Serine-Threonine KinasesWDHD1 protein, human

Identifiers

PMID38865090
PMCPMC11169917

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.