Evidence map›Paper›PMID 38864382›Full record

ArticleMolecular genetics & genomic medicine2024

A novel missense variant located within the zinc finger domain of the GLI3 gene was identified in a Vietnamese pedigree with index finger polydactyly.

Thy Ngoc Nguyen, Giang Son Tran, Hai Duc Hoang, Long Giang Nguyen

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Article in Molecular genetics & genomic medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Thy Ngoc NguyenDepartment of Life Sciences, University of Science and Technology of Hanoi, Vietnam Academy of Science and Technology, Hanoi, Vietnam.ORCID https://orcid.org/0000-0002-3181-9209
Giang Son TranDepartment of Information and Communication Technology, University of Science and Technology of Hanoi, Vietnam Academy of Science and Technology, Hanoi, Vietnam.
Hai Duc HoangDepartment of Orthopedics, Vietnam National Children's Hospital, Hanoi, Vietnam.
Long Giang NguyenDepartment of Management Information System, Institute of Information Technology, Vietnam Academy of Science and Technology, Hanoi, Vietnam.

Funding

Vietnam Academy of Science and Technology VAST01.04/23-24
6 · The paper itself

Abstract

backgroundPolydactyly, particularly of the index finger, remains an intriguing anomaly for which no specific gene or locus has been definitively linked to this phenotype. In this study, we conducted an investigation of a three-generation family displaying index finger polydactyly.

methodsExome sequencing was conducted on the patient, with a filtration to identify potential causal variation. Validation of the obtained variant was conducted by Sanger sequencing, encompassing all family members.

resultsExome analysis uncovered a novel heterozygous missense variant (c.1482A>T; p.Gln494His) at the zinc finger DNA-binding domain of the GLI3 protein within the proband and all affected family members. Remarkably, the variant was absent in unaffected individuals within the pedigree, underscoring its association with the polydactyly phenotype. Computational analyses revealed that GLI3 p.Gln494His impacts a residue that is highly conserved across species.

conclusionThe GLI3 zinc finger DNA-binding region is an essential part of the Sonic hedgehog signaling pathway, orchestrating crucial aspects of embryonic development through the regulation of target gene expression. This novel finding not only contributes valuable insights into the molecular pathways governing polydactyly during embryonic development but also has the potential to enhance diagnostic and screening capabilities for this condition in clinical settings.

Indexed as

Mutation, MissenseNerve Tissue ProteinsPedigreePolydactylyZinc Finger Protein Gli3FemaleFingersHeterozygoteHumansKruppel-Like Transcription FactorsMaleSoutheast Asian PeopleZinc FingersGLI3 protein, humanKruppel-Like Transcription FactorsNerve Tissue ProteinsZinc Finger Protein Gli3exome sequencingGLI3polydactylysonic hedgehog pathwayzinc‐finger domain

Identifiers

PMID38864382
PMCPMC11167515

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.