Evidence map›Paper›PMID 38862479›Full record

ArticleNature communications2024

Spatially resolved multiomics on the neuronal effects induced by spaceflight in mice.

Yuvarani Masarapu, Egle Cekanaviciute, Zaneta Andrusivova, Jakub O Westholm, Åsa Björklund, Robin Fallegger, Pau Badia-I-Mompel, Valery Boyko, Shubha Vasisht, Amanda Saravia-Butler and 14 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Gut microbes · 2026
    Article
  3. Article
  4. Long-term molecular effects ofNPJ microgravity · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Yuvarani Masarapu *Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-3267-2085
Egle Cekanaviciute *Space Biosciences Division, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA.ORCID http://orcid.org/0000-0003-3306-1806
Zaneta Andrusivova *Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, Stockholm, Sweden.
Jakub O WestholmNational Bioinformatics Infrastructure Sweden, Department of Biochemistry and Biophysics, Stockholm University, Science for Life Laboratory, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-6849-6220
Åsa BjörklundDepartment of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.ORCID http://orcid.org/0000-0003-2224-7090
Robin FalleggerHeidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-3264-6028
Pau Badia-I-MompelHeidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-1004-3923
Valery BoykoSpace Biosciences Division, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA.ORCID http://orcid.org/0000-0002-3724-9294
Shubha VasishtDepartment of Biomedical and Health Informatics, The Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA.
Amanda Saravia-ButlerKBR, Space Biosciences Division, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA.
Samrawit GebreSpace Biosciences Division, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA.
Enikő LázárScience for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-8664-7531
Marta GrazianoDepartment of Neuroscience, Karolinska Institutet, Biomedicum, Solna, Sweden.
Solène FrapardScience for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-2649-7225
Robert G HinshawNASA Postdoctoral Program - Oak Ridge Associated Universities, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA.ORCID http://orcid.org/0000-0003-0060-7753
Olaf BergmannDepartment of Cell and Molecular Biology, Karolinska Institute, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-1065-4107
Deanne M TaylorDepartment of Biomedical and Health Informatics, The Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0002-3302-4610
Douglas C WallaceCenter for Mitochondrial and Epigenomic Medicine, Children's Hospital of Philadelphia and Department of Pediatrics, Division of Human Genetics, The University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-7480-8278
Christer SylvénDepartment of Medicine, Karolinska Institute, Huddinge, Sweden.
Konstantinos MeletisDepartment of Neuroscience, Karolinska Institutet, Biomedicum, Solna, Sweden.ORCID http://orcid.org/0000-0001-5665-4781
Julio Saez-RodriguezHeidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-8552-8976
Jonathan M GalazkaSpace Biosciences Division, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA.ORCID http://orcid.org/0000-0002-4153-0249
Sylvain V CostesSpace Biosciences Division, NASA Ames Research Center, Moffett Field, Mountain View, CA, 94035, USA. sylvain.v.costes@nasa.gov.ORCID http://orcid.org/0000-0002-8542-2389
Stefania GiacomelloScience for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, Stockholm, Sweden. stefania.giacomello@scilifelab.se.ORCID http://orcid.org/0000-0003-0738-1574

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Impairment of the central nervous system (CNS) poses a significant health risk for astronauts during long-duration space missions. In this study, we employed an innovative approach by integrating single-cell multiomics (transcriptomics and chromatin accessibility) with spatial transcriptomics to elucidate the impact of spaceflight on the mouse brain in female mice. Our comparative analysis between ground control and spaceflight-exposed animals revealed significant alterations in essential brain processes including neurogenesis, synaptogenesis and synaptic transmission, particularly affecting the cortex, hippocampus, striatum and neuroendocrine structures. Additionally, we observed astrocyte activation and signs of immune dysfunction. At the pathway level, some spaceflight-induced changes in the brain exhibit similarities with neurodegenerative disorders, marked by oxidative stress and protein misfolding. Our integrated spatial multiomics approach serves as a stepping stone towards understanding spaceflight-induced CNS impairments at the level of individual brain regions and cell types, and provides a basis for comparison in future spaceflight studies. For broader scientific impact, all datasets from this study are available through an interactive data portal, as well as the National Aeronautics and Space Administration (NASA) Open Science Data Repository (OSDR).

Indexed as

BrainNeuronsSpace FlightAnimalsAstrocytesFemaleGene Expression ProfilingMiceMice, Inbred C57BLMultiomicsNeurogenesisOxidative StressSingle-Cell AnalysisSynaptic TransmissionTranscriptomeWeightlessness

Identifiers

PMID38862479
PMCPMC11166911

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.