Evidence map›Paper›PMID 38862452›Full record

ArticleNan fang yi ke da xue xue bao = Journal of Southern Medical University2024

[Identification of potential pathogenic genes of intestinal metaplasia based on transcriptomic sequencing and bioinformatics analysis].

B Pei, Y Zhang, S Wei, Y Mei, B Song, G Dong, Z Wen, X Li

Abstract readEnglish Abstract
In one paragraph

Article in Nan fang yi ke da xue xue bao = Journal of Southern Medical University, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

B PeiSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.
Y ZhangSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.
S WeiSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.
Y MeiSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.
B SongSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.
G DongSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.
Z WenFirst Clinical Medical College of Nanjing Medical University, Nanjing 210000, China.
X LiSecond Affiliated Hospital of Anhui University of Chinese Medicine, Anhui 230000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo explore the potential pathogenic genes of intestinal metaplasia.

methodsTwenty-one patients with intestinal metaplasia admitted to the Department of Gastroenterology at the Second Affiliated Hospital of Anhui University of Chinese Medicine from January, 2022 to June, 2022, and 21 healthy subjects undergoing gastroscopic examination during the same period were enrolled in this study. All the participants underwent gastroscopy and pathological examination, and gastric tissue samples were collected for transcriptome sequencing to screen for differentially expressed genes (DEGs). The biological functions of the DEGs were analyzed using bioinformatics analysis, and qRT-PCR was used to validate the results.

resultsTranscriptomic sequencing identified a total of 1373 DEGs, including 827 upregulated and 546 downregulated ones. The top 6 upregulated genes (

conclusion

Indexed as

Computational BiologyMetaplasiaFatty Acid-Binding ProteinsFemaleGastric MucosaGene Expression ProfilingHomeodomain ProteinsHumansIntestinesMaleMucin-2RNA, MessengerTranscriptomeCDX1 protein, humanFABP1 protein, humanFatty Acid-Binding ProteinsHomeodomain ProteinsMUC2 protein, humanMucin-2RNA, Messengerbioinformaticsintestinal metaplasiapathogenic genestranscriptomics sequencing

Identifiers

PMID38862452
PMCPMC11166712

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.