Evidence map›Paper›PMID 38862429›Full record

ArticleGenomics, proteomics & bioinformatics2024

A Two-color Single-molecule Sequencing Platform and Its Clinical Applications.

Fang Chen, Bin Liu, Meirong Chen, Zefei Jiang, Zhiliang Zhou, Ping Wu, Meng Zhang, Huan Jin, Linsen Li, Liuyan Lu and 25 more

Abstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Fang ChenGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-0028-8967
Bin LiuGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-5051-8006
Meirong ChenGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-2600-3256
Zefei JiangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-6053-9030
Zhiliang ZhouGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-9003-3177
Ping WuGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-8717-3067
Meng ZhangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-7588-7182
Huan JinGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-9848-516X
Linsen LiGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-9206-3740
Liuyan LuGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-8680-1957
Huan ShangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-8703-999X
Lei LiuGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-2794-6982
Weiyue ChenGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-5004-4376
Jianfeng XuGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-5127-2300
Ruitao SunGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-4165-6615
Guangming WangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-7833-341X
Jiao ZhengGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-6996-7453
Jifang QiGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-9770-2302
Bo YangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-9033-3479
Lidong ZengGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-7189-883X
Yan LiGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-4718-5551
Hui LvGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-0252-6706
Nannan ZhaoGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-4733-1053
Wen WangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-0074-570X
Jinsen CaiGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-8621-096X
Yongfeng LiuGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-2844-1807
Weiwei LuoGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-5872-1482
Juan ZhangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0003-3072-9145
Yanhua ZhangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0002-9732-740X
Jicai FanGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-8002-5678
Haitao DanGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-5739-5849
Xuesen HeGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-8809-5638
Wei HuangGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-9849-3883
Lei SunGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-8837-3183
Qin YanGeneMind Biosciences Co., Ltd., Shenzhen 518000, China.ORCID 0000-0001-6748-6234

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA sequencers have become increasingly important research and diagnostic tools over the past 20 years. In this study, we developed a single-molecule desktop sequencer, GenoCare 1600 (GenoCare), which utilizes amplification-free library preparation and two-color sequencing-by-synthesis chemistry, making it more user-friendly compared with previous single-molecule sequencing platforms for clinical use. Using the GenoCare platform, we sequenced an Escherichia coli standard sample and achieved a consensus accuracy exceeding 99.99%. We also evaluated the sequencing performance of this platform in microbial mixtures and coronavirus disease 2019 (COVID-19) samples from throat swabs. Our findings indicate that the GenoCare platform allows for microbial quantitation, sensitive identification of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus, and accurate detection of virus mutations, as confirmed by Sanger sequencing, demonstrating its remarkable potential in clinical application.

Indexed as

COVID-19SARS-CoV-2Escherichia coliHigh-Throughput Nucleotide SequencingHumansMutationSequence Analysis, DNAGenoCareMicrobial quantitationSARS-CoV-2Single-molecule sequencingVariant detection

Identifiers

PMID38862429
PMCPMC11423845

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.