Evidence map›Paper›PMID 38861370›Full record

ArticleJournal of synchrotron radiation2024

X-ray phase-contrast tomography of cells manipulated with an optical stretcher.

Jan Philipp Burchert, Jasper Frohn, Ulrike Rölleke, Hendrik Bruns, Boram Yu, Sophie Charlotte Gleber, Roland Stange, Madleen Busse, Markus Osterhoff, Tim Salditt and 1 more

Abstract read
In one paragraph

Article in Journal of synchrotron radiation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jan Philipp BurchertInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.ORCID 0000-0003-1923-9743
Jasper FrohnInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
Ulrike RöllekeInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
Hendrik BrunsInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
Boram YuInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
Sophie Charlotte GleberInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
Roland StangeRS Zelltechnik, 94508 Schöllnach, Germany.
Madleen BusseBiomedical Physics, School of Science, Technical University Munich, Boltzmannstraße 11, 85748 Garching, Germany.
Markus OsterhoffInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.ORCID 0000-0002-7865-515X
Tim SaldittInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.ORCID 0000-0003-4636-0813
Sarah KösterInstitute for X-ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.ORCID 0000-0002-0009-1024

Funding

Bundesministerium für Bildung und Forschung BMBF05K19MG3Bundesministerium für Bildung und Forschung BMBF05K22MG3Deutsche Forschungsgemeinschaft DAPHNE4NFDI-460248799Deutsche Forschungsgemeinschaft EXC 2067/1-390729940Deutsche Forschungsgemeinschaft KO 3572/7-1-429958739Deutsche Forschungsgemeinschaft RTG 2756-449750155
6 · The paper itself

Abstract

X-rays can penetrate deeply into biological cells and thus allow for examination of their internal structures with high spatial resolution. In this study, X-ray phase-contrast imaging and tomography is combined with an X-ray-compatible optical stretcher and microfluidic sample delivery. Using this setup, individual cells can be kept in suspension while they are examined with the X-ray beam at a synchrotron. From the recorded holograms, 2D phase shift images that are proportional to the projected local electron density of the investigated cell can be calculated. From the tomographic reconstruction of multiple such projections the 3D electron density can be obtained. The cells can thus be studied in a hydrated or even living state, thus avoiding artifacts from freezing, drying or embedding, and can in principle also be subjected to different sample environments or mechanical strains. This combination of techniques is applied to living as well as fixed and stained NIH3T3 mouse fibroblasts and the effect of the beam energy on the phase shifts is investigated. Furthermore, a 3D algebraic reconstruction scheme and a dedicated mathematical description is used to follow the motion of the trapped cells in the optical stretcher for multiple rotations.

Indexed as

biological cellshigh-resolution imagingoptical stretcherX-ray phase-contrast tomographyX-ray stain

Identifiers

PMID38861370
PMCPMC11226146

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.