Evidence map›Paper›PMID 38861173›Full record

ArticlePlant cell reports2024

Genome-wide identification of the SAUR gene family and screening for SmSAURs involved in root development in Salvia miltiorrhiza.

Wei Wang, Yuwei Zheng, Lin Qiu, Dongfeng Yang, Ziyang Zhao, Yuanyuan Gao, Ru Meng, Hongguang Zhao, Shuncang Zhang

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Article in Plant cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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6citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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  3. Transcriptome Analysis ofInternational journal of molecular sciences · 2025
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5 · Who and what money

Authors and funding

9 authors.

Wei WangCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Yuwei ZhengCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Lin QiuCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Dongfeng YangKey Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, Zhejiang, China.
Ziyang ZhaoCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Yuanyuan GaoCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Ru MengCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Hongguang ZhaoShaanxi Tasly Plants Pharmaceutical Co., Ltd., Shangluo, 726000, Shaanxi, China.
Shuncang ZhangCollege of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, Jiangsu, China. zhangsc@yzu.edu.cn.ORCID http://orcid.org/0000-0001-6856-0408

Funding

Independent Innovation Fund Project of Agricultural Science and Technology in Jiangsu Province CX(23)3113Key project at central government level: The ability establishment of sustainable use for valuable Chinese medicine resources 2060302Major Science and Technology Projects of Breeding New Varieties of Agriculture in Zhejiang Province 2021C02074National Natural Science Foundation of China 31700257Postgraduate Research & Practice Innovation Program of Jiangsu Province KYCX22_3473Science and Technology Development Project of Traditional Chinese Medicine in Jiangsu Province MS2022154Zhejiang Provincial Natural Science Foundation of China LR21H280002
6 · The paper itself

Abstract

key messageSmSAUR4, SmSAUR18, SmSAUR28, SmSAUR37, and SmSAUR38 were probably involved in the auxin-mediated root development in Salvia miltiorrhiza. Salvia miltiorrhiza is a widely utilized medicinal plant in China. Its roots and rhizomes are the main medicinal portions and are closely related to the quality of this herb. Previous studies have revealed that auxin plays pivotal roles in S. miltiorrhiza root development. Whether small auxin-up RNA genes (SAURs), which are crucial early auxin response genes, are involved in auxin-mediated root development in S. miltiorrhiza is worthy of investigation. In this study, 55 SmSAUR genes in S. miltiorrhiza were identified, and their physical and chemical properties, gene structure, cis-acting elements, and evolutionary relationships were analyzed. The expression levels of SmSAUR genes in different organs of S. miltiorrhiza were detected using RNA-seq combined with qRT‒PCR. The root development of S. miltiorrhiza seedlings was altered by the application of indole-3-acetic acid (IAA), and Pearson correlation coefficient analysis was conducted to screen SmSAURs that potentially participate in this physiological process. The diameter of primary lateral roots was positively correlated with SmSAUR4. The secondary lateral root number was positively correlated with SmSAUR18 and negatively correlated with SmSAUR4. The root length showed a positive correlation with SmSAUR28 and SmSAUR37 and a negative correlation with SmSAUR38. The fresh root biomass exhibited a positive correlation with SmSAUR38 and a negative correlation with SmSAUR28. The aforementioned SmSAURs were likely involved in auxin-mediated root development in S. miltiorrhiza. Our study provides a comprehensive overview of SmSAURs and provides the groundwork for elucidating the molecular mechanism underlying root morphogenesis in this species.

Indexed as

Gene Expression Regulation, PlantIndoleacetic AcidsPlant ProteinsPlant RootsSalvia miltiorrhizaGenes, PlantGenome, PlantMultigene FamilyPhylogenySeedlingsindoleacetic acidIndoleacetic AcidsPlant ProteinsPearson correlation coefficientRoot developmentSalvia miltiorrhizaSmall auxin-up RNATranscriptome

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.