Evidence map›Paper›PMID 38860825›Full record

ArticlemSystems2024

Dynamics of the viral community on the surface of a French smear-ripened cheese during maturation and persistence across production years.

Thomas Paillet, Quentin Lamy-Besnier, Clarisse Figueroa, Marie-Agnès Petit, Eric Dugat-Bony

Abstract read
In one paragraph

Article in mSystems, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Thomas PailletUniversité Paris-Saclay, INRAE, AgroParisTech, UMR SayFood, Palaiseau, France.
Quentin Lamy-BesnierUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.ORCID 0000-0002-7141-6340
Clarisse FigueroaUniversité Paris-Saclay, INRAE, AgroParisTech, UMR SayFood, Palaiseau, France.
Marie-Agnès PetitUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.ORCID 0000-0003-2242-2768
Eric Dugat-BonyUniversité Paris-Saclay, INRAE, AgroParisTech, UMR SayFood, Palaiseau, France.ORCID 0000-0002-5182-0063

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The surface of smear-ripened cheeses constitutes a dynamic microbial ecosystem resulting from the successive development of different microbial groups such as lactic acid bacteria, fungi, and ripening bacteria. Recent studies indicate that a viral community, mainly composed of bacteriophages, also represents a common and substantial part of the cheese microbiome. However, the composition of this community, its temporal variations, and associations between bacteriophages and their hosts remain poorly characterized. Here, we studied a French smear-ripened cheese by both viral metagenomics and 16S metabarcoding approaches to assess both the succession of phages and bacterial communities on the cheese surface during cheese ripening and their temporal variations in ready-to-eat cheeses over the years of production. We observed a clear transition of the phage community structure during ripening with a decreased relative abundance of viral species (vOTUs) associated with

Indexed as

BacteriophagesCheeseBacteriaFood MicrobiologyFranceMetagenomicsMicrobiotaViromebacteriophagescheesefermented foodmetagenomicsmetaviromemicrobial ecologypersistencesuccession

Identifiers

PMID38860825
PMCPMC11265279

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.