Evidence map›Paper›PMID 38860500›Full record

ArticleMolecular genetics & genomic medicine2024

Mutation spectrum of hearing loss patients in Northwest China: Identification of 20 novel variants.

Panpan Ma, Bingbo Zhou, Qichao Kang, Xue Chen, Xinyuan Tian, Ling Hui, Shengju Hao, Huiyan Wu, Chuan Zhang

Abstract readEditorial
In one paragraph

Article in Molecular genetics & genomic medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Panpan MaMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.ORCID https://orcid.org/0009-0001-4273-1819
Bingbo ZhouMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.
Qichao KangMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.
Xue ChenMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.
Xinyuan TianMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.ORCID https://orcid.org/0000-0003-4875-5288
Ling HuiMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.
Shengju HaoMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.
Huiyan WuMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.
Chuan ZhangMedical Genetics Center; Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases Lanzhou, Gansu Provincial Maternity and Child-Care Hospital, Gansu, China.ORCID https://orcid.org/0000-0002-4403-4830

Funding

Gansu Natural Science Foundation 21JR1RA045Gansu Natural Science Foundation 21JR1RA047Gansu Provincial Clinical Research Center for Birth Defects and Rare Diseases 21JR7RA680Gansu Provincial Science and Technology Plan Funding Project 20YF8FA093Gansu Provincial Science and Technology Plan Funding Project 22YF7FA094Lanzhou Science and Technology Plan Project 2021-1-182National Population and Reproductive Health Science Data Center 2005DKA32408National Science and Technology Resource Sharing Service Platform Project YCZYPT[2020]05-03
6 · The paper itself

Abstract

backgroundHearing loss (HL) is the most frequent sensory deficit in humans, with strong genetic heterogeneity. The genetic diagnosis of HL is very important to aid treatment decisions and to provide prognostic information and genetic counselling for the patient's family.

methodsWe detected and analysed 362 Chinese non-syndromic HL patients by screening of variants in 15 hot spot mutations. Subsequently, 40 patients underwent further whole-exome sequencing (WES) to determine genetic aetiology. The candidate variants were verified using Sanger sequencing. Twenty-three carrier couples with pathogenic variants or likely pathogenic variants chose to proceed with prenatal diagnosis using Sanger sequencing.

resultsAmong the 362 HL patients, 102 were assigned a molecular diagnosis with 52 different variants in 22 deafness genes. A total of 41 (11.33%) cases with the biallelic GJB2 (OMIM # 220290) gene mutations were detected, and 21 (5.80%) had biallelic SLC26A4 (OMIM # 605646) mutations. Mitochondrial gene (OMIM # 561000) mutations were detected in seven (1.93%) patients. Twenty of the variants in 15 deafness genes were novel. SOX10 (OMIM # 602229), MYO15A (OMIM # 602666) and WFS1 (OMIM # 606201) were each detected in two patients. Meanwhile, OSBPL2 (OMIM # 606731), RRM2B (OMIM # 604712), OTOG (OMIM # 604487), STRC (OMIM # 606440), PCDH15 (OMIM # 605514), LOXHD1 (OMIM # 613072), CDH23 (OMIM # 605516), TMC1 (OMIM # 606706), CHD7 (OMIM # 608892), DIAPH3 (OMIM # 614567), TBC1D24 (OMIM # 613577), TIMM8A (OMIM # 300356), PTPRQ (OMIM # 603317), SALL1 (OMIM # 602218), and GSDME (OMIM # 608798) were each detected in one patient. In addition, as regards one couple with a heterozygous variant of CDH23 and PCDH15, respectively, prenatal diagnosis results suggest that the foetus had double heterozygous (DH) variants of CDH23 and PCDH15, which has a high risk to cause ID/F type Usher syndrome.

conclusionOur study expanded the spectrum of deafness gene variation, which will contribute to the genetic diagnosis, prenatal diagnosis and the procreation guidance of deaf couple. In addition, the deafness caused by two genes should be paid attention to in the prenatal diagnosis of families with both deaf patients.

Indexed as

MutationAdolescentAdultCadherin Related ProteinsChildChild, PreschoolChinaFemaleHearing LossHumansMaleSulfate TransportersCadherin Related ProteinsCDH23 protein, humanSLC26A4 protein, humanSulfate Transporters

Identifiers

PMID38860500
PMCPMC11165335

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.