Evidence map›Paper›PMID 38860143›Full record

ArticleIn silico pharmacology2024

Identification of molecular interactions of pesticides with keratinase for their potential to inhibit keratin biodegradation.

Indira Gahatraj, Rubina Roy, Anupama Sharma, Banashree Chetia Phukan, Sanjeev Kumar, Diwakar Kumar, Piyush Pandey, Pallab Bhattacharya, Anupom Borah

Abstract read
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Article in In silico pharmacology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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2 · The registry

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Indira GahatrajDepartment of Life Science and Bioinformatics, Assam University, Silchar, 788011 India.
Rubina RoyDepartment of Life Science and Bioinformatics, Assam University, Silchar, 788011 India.
Anupama SharmaDepartment of Computational Sciences, Central University of Punjab, Bathinda, 151401 India.
Banashree Chetia PhukanDepartment of Life Science and Bioinformatics, Assam University, Silchar, 788011 India.
Sanjeev KumarDepartment of Life Science and Bioinformatics, Assam University, Silchar, 788011 India.
Diwakar KumarDepartment of Microbiology, Assam University, Silchar, 788011 India.
Piyush PandeyDepartment of Microbiology, Assam University, Silchar, 788011 India.
Pallab BhattacharyaDepartment of Pharmacology and Toxicology, National Institute of Pharmaceutical Education and Research (NIPER), Ahmedabad, 382355 Gandhinagar, Gujarat India.
Anupom BorahDepartment of Life Science and Bioinformatics, Assam University, Silchar, 788011 India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recalcitrant, fibrous protein keratin is found in the outermost layer of vertebrate skin, feathers, hair, horn, and hooves. Approximately, 10 million tons of keratin wastes are produced annually worldwide, of which around 8.5 million tons are from feather wastes. The biodegradation of keratin has been a challenge due to the lack of understanding of biological parameters that modulate the process. Few soil-borne microbes are capable of producing keratinase enzyme which has the potential to degrade the hard keratin. However, various pesticides are abundantly used for the management of poultry farms and reports suggest the presence of the pesticide residues in feather. Hence, it was hypothesized that pesticides would interact with the substrate-binding or allosteric sites of the keratinase enzyme and interferes with the keratin-degradation process. In the present study, molecular interactions of 20 selected pesticides with the keratinase enzyme were analyzed by performing molecular docking. In blind docking, 14 out of 20 pesticides showed higher inhibitory potential than the known inhibitor phenylmethylsulfonyl flouride, all of which exhibited higher inhibitory potential in site-specific docking. The stability and strength of the protein complexes formed by the top best potential pesticides namely fluralaner, teflubenzuron, cyhalothrin, and cyfluthrin has been further validated by molecular dynamic simulation studies. The present study is the first report for the preliminary investigation of the keratinase-inhibitory potential of pesticides and highlights the plausible role of these pesticides in hindering the biological process of keratin degradation and thereby their contribution in environmental pollution. Graphical abstract: Illustration depicting the hypothesis, experimental procedure, and the resultant keratinase-inhibitory potential of selected pesticides.

Indexed as

Blind dockingHydrogen bondKeratinaseMolecular dynamic simulationPesticideSite-specific docking

Identifiers

PMID38860143
PMCPMC11162408

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.