Evidence map›Paper›PMID 38858602›Full record

ArticleThe EMBO journal2024

K128 ubiquitination constrains RAS activity by expanding its binding interface with GAP proteins.

Wout Magits, Mikhail Steklov, Hyunbum Jang, Raj N Sewduth, Amir Florentin, Benoit Lechat, Aidana Sheryazdanova, Mingzhen Zhang, Michal Simicek, Gali Prag and 2 more

Abstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. SYVN1-provoked RASA1 ubiquitination promotes pulmonary inflammation in chronic obstructive pulmonary disease.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Article
  4. Review
  5. Article
  6. Article
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  8. Review
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  13. Molecular principles underlying aggressive cancers.Signal transduction and targeted therapy · 2025
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Wout Magits *VIB-KU Leuven Center for Cancer Biology, VIB, 3000, Leuven, Belgium.ORCID http://orcid.org/0000-0002-4068-8300
Mikhail Steklov *VIB-KU Leuven Center for Cancer Biology, VIB, 3000, Leuven, Belgium.
Hyunbum JangComputational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Laboratory of Cancer ImmunoMetabolism, National Cancer Institute, Frederick, MD, 21702, USA.
Raj N SewduthVIB-KU Leuven Center for Cancer Biology, VIB, 3000, Leuven, Belgium.ORCID http://orcid.org/0000-0002-9238-3242
Amir FlorentinSchool of Neurobiology, Biochemistry & Biophysics, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, 69978, Tel Aviv, Israel.ORCID http://orcid.org/0009-0007-8059-2139
Benoit LechatVIB-KU Leuven Center for Cancer Biology, VIB, 3000, Leuven, Belgium.
Aidana SheryazdanovaVIB-KU Leuven Center for Cancer Biology, VIB, 3000, Leuven, Belgium.ORCID http://orcid.org/0000-0001-6351-3493
Mingzhen ZhangComputational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Laboratory of Cancer ImmunoMetabolism, National Cancer Institute, Frederick, MD, 21702, USA.
Michal SimicekDepartment of Hematooncology, University Hospital Ostrava, Ostrava, Czech Republic.
Gali PragSchool of Neurobiology, Biochemistry & Biophysics, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, 69978, Tel Aviv, Israel.ORCID http://orcid.org/0000-0003-4703-7161
Ruth NussinovComputational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Laboratory of Cancer ImmunoMetabolism, National Cancer Institute, Frederick, MD, 21702, USA.ORCID http://orcid.org/0000-0002-8115-6415
Anna SablinaVIB-KU Leuven Center for Cancer Biology, VIB, 3000, Leuven, Belgium. anna.sablina@kuleuven.be.ORCID http://orcid.org/0000-0001-9526-4014

Funding

EC | Horizon 2020 Framework Programme (H2020) ub-RASDisease,ID: 772649Israel Cancer Research Fund (ICRF) 940283Israel Science Foundation (ISF) 1440/21NCI NIH HHS HHSN261201500003CNCI NIH HHS HHSN261201500003ITechnologická Agentura České Republiky (Czech Technological Agency) GA CR 22-26981S
6 · The paper itself

Abstract

The RAS pathway is among the most frequently activated signaling nodes in cancer. However, the mechanisms that alter RAS activity in human pathologies are not entirely understood. The most prevalent post-translational modification within the GTPase core domain of NRAS and KRAS is ubiquitination at lysine 128 (K128), which is significantly decreased in cancer samples compared to normal tissue. Here, we found that K128 ubiquitination creates an additional binding interface for RAS GTPase-activating proteins (GAPs), NF1 and RASA1, thus increasing RAS binding to GAP proteins and promoting GAP-mediated GTP hydrolysis. Stimulation of cultured cancer cells with growth factors or cytokines transiently induces K128 ubiquitination and restricts the extent of wild-type RAS activation in a GAP-dependent manner. In KRAS mutant cells, K128 ubiquitination limits tumor growth by restricting RAL/ TBK1 signaling and negatively regulating the autocrine circuit induced by mutant KRAS. Reduction of K128 ubiquitination activates both wild-type and mutant RAS signaling and elicits a senescence-associated secretory phenotype, promoting RAS-driven pancreatic tumorigenesis.

Indexed as

Protein BindingProto-Oncogene Proteins p21(ras)UbiquitinationAnimalsCell Line, TumorGTP PhosphohydrolasesHumansLysineMembrane ProteinsMiceNeurofibromin 1p120 GTPase Activating ProteinProtein Serine-Threonine Kinasesras ProteinsSignal TransductionGTP PhosphohydrolasesKRAS protein, humanLysineMembrane ProteinsNeurofibromin 1NF1 protein, humanNRAS protein, humanp120 GTPase Activating ProteinProtein Serine-Threonine KinasesProto-Oncogene Proteins p21(ras)RASA1 protein, humanras ProteinsTBK1 protein, humanNF1RAS InteractomeRAS SignalingSenescence-Associated Secretory PhenotypeUbiquitination

Identifiers

PMID38858602
PMCPMC11251195

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.