Evidence map›Paper›PMID 38857467›Full record

ArticleJournal of proteome research2024

Modeling the Simultaneous Dynamics of Proteins in Blood Plasma and the Cerebrospinal Fluid in Human

Pierre Giroux, Jérôme Vialaret, Jana Kindermans, Audrey Gabelle, Luc Bauchet, Christophe Hirtz, Sylvain Lehmann, Jacques Colinge

Abstract read
In one paragraph

Article in Journal of proteome research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Pierre GirouxUniversité de Montpellier, 34090 Montpellier, France.
Jérôme VialaretLBPC-PPC CHU Montpellier, INM, Inserm, 34295 Montpellier, France.
Jana KindermansLBPC-PPC CHU Montpellier, INM, Inserm, 34295 Montpellier, France.
Audrey GabelleUniversité de Montpellier, 34090 Montpellier, France.
Luc BauchetUniversité de Montpellier, 34090 Montpellier, France.
Christophe HirtzUniversité de Montpellier, 34090 Montpellier, France.
Sylvain LehmannUniversité de Montpellier, 34090 Montpellier, France.
Jacques ColingeUniversité de Montpellier, 34090 Montpellier, France.ORCID 0000-0003-2466-4824

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The analysis of protein dynamics or turnover in patients has the potential to reveal altered protein recycling, such as in Alzheimer's disease, and to provide informative data regarding drug efficacy or certain biological processes. The observed protein dynamics in a solid tissue or a fluid is the net result of not only protein synthesis and degradation but also transport across biological compartments. We report an accurate 3-biological compartment model able to simultaneously account for the protein dynamics observed in blood plasma and the cerebrospinal fluid (CSF) including a hidden central nervous system (CNS) compartment. We successfully applied this model to 69 proteins of a single individual displaying similar or very different dynamics in plasma and CSF. This study puts a strong emphasis on the methods and tools needed to develop this type of model. We believe that it will be useful to any researcher dealing with protein dynamics data modeling.

Indexed as

Blood ProteinsCerebrospinal Fluid ProteinsAlzheimer DiseaseHumansModels, BiologicalBlood ProteinsCerebrospinal Fluid Proteinscerebrospinal fluidpharmacokineticsphysiologyprotein dynamicsproteomicssystems biology

Identifiers

PMID38857467
PMCPMC11232576

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.