Evidence map›Paper›PMID 38856222›Full record

ReviewMicrobiology and molecular biology reviews : MMBR2024

Bacterial cell volume regulation and the importance of cyclic di-AMP.

Alexander J Foster, Marco van den Noort, Bert Poolman

Abstract readReview
In one paragraph

Review in Microbiology and molecular biology reviews : MMBR, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Mislocalization of PBPs inMicrobiology spectrum · 2026
    Article
  2. Review
  3. Article
  4. mBio · 2026
    Article
  5. Article
  6. bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Review
  9. Regulation of potassium homeostasis inFrontiers in microbiology · 2026
    Article
  10. Article
  11. Clinical microbiology reviews · 2025
    Review
  12. c-di-AMP is an envoy of inflammation.Nature chemical biology · 2025
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alexander J Foster *Department of Biochemistry, Groningen Biomolecular Science and Biotechnology Institute, University of Groningen, Groningen, the Netherlands.ORCID 0000-0002-7009-073X
Marco van den Noort *Department of Biochemistry, Groningen Biomolecular Science and Biotechnology Institute, University of Groningen, Groningen, the Netherlands.ORCID 0000-0002-2025-461X
Bert PoolmanDepartment of Biochemistry, Groningen Biomolecular Science and Biotechnology Institute, University of Groningen, Groningen, the Netherlands.ORCID 0000-0002-1455-531X

Funding

NWO BaSyC Gravitation programNWO OCENW.KLEIN.526
6 · The paper itself

Abstract

SUMMARYNucleotide-derived second messengers are present in all domains of life. In prokaryotes, most of their functionality is associated with general lifestyle and metabolic adaptations, often in response to environmental fluctuations of physical parameters. In the last two decades, cyclic di-AMP has emerged as an important signaling nucleotide in many prokaryotic lineages, including Firmicutes, Actinobacteria, and Cyanobacteria. Its importance is highlighted by the fact that both the lack and overproduction of cyclic di-AMP affect viability of prokaryotes that utilize cyclic di-AMP, and that it generates a strong innate immune response in eukaryotes. In bacteria that produce the second messenger, most molecular targets of cyclic di-AMP are associated with cell volume control. Besides, other evidence links the second messenger to cell wall remodeling, DNA damage repair, sporulation, central metabolism, and the regulation of glycogen turnover. In this review, we take a biochemical, quantitative approach to address the main cellular processes that are directly regulated by cyclic di-AMP and show that these processes are very connected and require regulation of a similar set of proteins to which cyclic di-AMP binds. Altogether, we argue that cyclic di-AMP is a master regulator of cell volume and that other cellular processes can be connected with cyclic di-AMP through this core function. We further highlight important directions in which the cyclic di-AMP field has to develop to gain a full understanding of the cyclic di-AMP signaling network and why some processes are regulated, while others are not.

Indexed as

BacteriaBacterial ProteinsCell WallDinucleoside PhosphatesGene Expression Regulation, BacterialSecond Messenger SystemsSignal TransductionBacterial Proteinscyclic diadenosine phosphateDinucleoside Phosphatescell volume regulationcell wall metabolismcyclic di-AMPosmoregulationpotassium and compatible solute transportsecond messengersignaling nucleotide

Identifiers

PMID38856222
PMCPMC11332354

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.