Evidence map›Paper›PMID 38855250›Full record

ArticlePeerJ. Computer science2024

Hybrid mRMR and multi-objective particle swarm feature selection methods and application to metabolomics of traditional Chinese medicine.

Mengting Zhang, Jianqiang Du, Bin Nie, Jigen Luo, Ming Liu, Yang Yuan

Abstract read
In one paragraph

Article in PeerJ. Computer science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mengting ZhangSchool of Computer Science, Jiangxi University of Chinese Medicine, Nanchang, China.
Jianqiang DuSchool of Computer Science, Jiangxi University of Chinese Medicine, Nanchang, China.
Bin NieSchool of Computer Science, Jiangxi University of Chinese Medicine, Nanchang, China.
Jigen LuoSchool of Computer Science, Jiangxi University of Chinese Medicine, Nanchang, China.
Ming LiuSchool of Computer Science, Jiangxi University of Chinese Medicine, Nanchang, China.
Yang YuanSchool of Computer Science, Jiangxi University of Chinese Medicine, Nanchang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolomics data has high-dimensional features and a small sample size, which is typical of high-dimensional small sample (HDSS) data. Too high a dimensionality leads to the curse of dimensionality, and too small a sample size tends to trigger overfitting, which poses a challenge to deeper mining in metabolomics. Feature selection is a valuable technique for effectively handling the challenges HDSS data poses. For the feature selection problem of HDSS data in metabolomics, a hybrid Max-Relevance and Min-Redundancy (mRMR) and multi-objective particle swarm feature selection method (MCMOPSO) is proposed. Experimental results using metabolomics data and various University of California, Irvine (UCI) public datasets demonstrate the effectiveness of MCMOPSO in selecting feature subsets with a limited number of high-quality features. MCMOPSO achieves this by efficiently eliminating irrelevant and redundant features, showcasing its efficacy. Therefore, MCMOPSO is a powerful approach for selecting features from high-dimensional metabolomics data with limited sample sizes.

Indexed as

Feature selectionHigh dimensional small samplesMetabolomicsMulti-objective particle swarm

Identifiers

PMID38855250
PMCPMC11157565

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.