Evidence map›Paper›PMID 38854132›Full record

ArticlebioRxiv : the preprint server for biology2024

Phylogeny and species delimitation of ciliates in the genus

Shahed Uddin Ahmed Shazib, Auden Cote-L'Heureux, Ragib Ahsan, Sergio A Muñoz-Gómez, JunMo Lee, Laura A Katz, Mann Kyoon Shin

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Shahed Uddin Ahmed ShazibDepartment of Biological Sciences, University of Ulsan, Ulsan 44610, South Korea.ORCID 0000-0001-9470-8568
Auden Cote-L'HeureuxDepartment of Biological Sciences, Smith College, Northampton, Massachusetts 01063, USA.ORCID 0000-0001-5793-7695
Ragib AhsanDepartment of Biological Sciences, University of Ulsan, Ulsan 44610, South Korea.ORCID 0000-0003-4550-9575
Sergio A Muñoz-GómezDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana 47907, USA.ORCID 0000-0002-6200-474X
JunMo LeeDepartment of Oceanography, Kyungpook National University, Daegu 41566, South Korea.ORCID 0000-0002-5610-543X
Laura A KatzDepartment of Biological Sciences, Smith College, Northampton, Massachusetts 01063, USA.ORCID 0000-0002-9138-4702
Mann Kyoon ShinDepartment of Biological Sciences, University of Ulsan, Ulsan 44610, South Korea.ORCID 0000-0001-6592-1204

Funding

Assessing evolutionary patterns in uncultivable ciliates and their microbiomes by combining single-cell transcriptomics and single-cell genomicsR15HG010409 · NHGRI · SMITH COLLEGE · PI KATZ, LAURA ALINE · 2019 to 2019
$400k
NHGRI NIH HHS R15 HG010409
6 · The paper itself

Abstract

Ciliates are single-celled microbial eukaryotes that diverged from other eukaryotic lineages over a billion years ago. The extensive evolutionary timespan of ciliate has led to enormous genetic and phenotypic changes, contributing significantly to their high level of diversity. Recent analyses based on molecular data have revealed numerous cases of cryptic species complexes in different ciliate lineages, demonstrating the need for a robust approach to delimit species boundaries and elucidate phylogenetic relationships. Heterotrich ciliate species of the genus

Indexed as

cryptic speciesmultispecies coalescent (MSC)read mappingscRNA-seqspecies tree

Identifiers

PMID38854132
PMCPMC11160781

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.