Evidence map›Paper›PMID 38853836›Full record

ArticlebioRxiv : the preprint server for biology2024

Role of the CTCF Binding Site in Human T-Cell Leukemia Virus-1 Pathogenesis.

Ancy Joseph, Xiaogang Cheng, John Harding, Jacob Al-Saleem, Patrick Green, Deborah Veis, Daniel Rauch, Lee Ratner

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Ancy JosephDepartment of Medicine, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0001-7371-1696
Xiaogang ChengDepartment of Medicine, Washington University School of Medicine, St Louis, MO, USA.
John HardingDepartment of Medicine, Washington University School of Medicine, St Louis, MO, USA.
Jacob Al-SaleemCenter for Retrovirus Research, The Ohio State University, Columbus, OH 43210.
Patrick GreenCenter for Retrovirus Research, The Ohio State University, Columbus, OH 43210.
Deborah VeisDepartment of Medicine, Washington University School of Medicine, St Louis, MO, USA.
Daniel RauchDepartment of Medicine, Washington University School of Medicine, St Louis, MO, USA.
Lee RatnerDepartment of Medicine, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0003-2744-7294

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
Role of Inflammation in Tax-mediated TumorigenesisP01CA100730 · NCI · WASHINGTON UNIVERSITY · PI Lee Ratner · 2003 to 2026
$44.8M
Inhibition of T-cell Receptor Signaling for Treatment of Adult T-cell Leukemia LymphomaR01CA258359 · NCI · WASHINGTON UNIVERSITY · PI Lee Ratner, Daniel Arthur Rauch · 2022 to 2026
$1.8M
Interaction of HTLV-1 Tax & Hbz in TransformationR21CA252869 · NCI · WASHINGTON UNIVERSITY · PI RATNER, LEE, RAUCH, DANIEL ARTHUR · 2021 to 2022
$401k
NCATS NIH HHS UL1 TR002345NCI NIH HHS P01 CA100730NCI NIH HHS P30 CA091842NCI NIH HHS R01 CA258359NCI NIH HHS R21 CA252869
6 · The paper itself

Abstract

During HTLV-1 infection, the virus integrates into the host cell genome as a provirus with a single CCCTC binding protein (CTCF) binding site (vCTCF-BS), which acts as an insulator between transcriptionally active and inactive regions. Previous studies have shown that the vCTCF-BS is important for maintenance of chromatin structure, regulation of viral expression, and DNA and histone methylation. Here, we show that the vCTCF-BS also regulates viral infection and pathogenesis

Indexed as

ATLCTCFDNA MethylationEpigenomeHTLV

Identifiers

PMID38853836
PMCPMC11160593

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.