Evidence map›Paper›PMID 38853176›Full record

ArticleMolecular diversity2025

FDI-6 inhibits VEGF-B expression in metastatic breast cancer: a combined in vitro and in silico study.

Zekeriya Duzgun, Funda Demirtaş Korkmaz, Egemen Akgün

Abstract read
In one paragraph

Article in Molecular diversity, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Zekeriya DuzgunDepartment of Medical Biology, Faculty of Medicine, Giresun University, Giresun, Turkey. zduzgun@gmail.com.
Funda Demirtaş KorkmazDepartment of Medical Biology, Faculty of Medicine, Giresun University, Giresun, Turkey.
Egemen AkgünDepartment of Medical Biology, Faculty of Medicine, Giresun University, Giresun, Turkey.

Funding

Giresun University Scientific Research Projects Coordination Unit SAĞ-BAP-A-250620-64
6 · The paper itself

Abstract

Angiogenesis is the process by which new blood vessels are formed to meet the oxygen and nutrient needs of tissues. This process is vitally important in many physiological and pathological conditions such as tumor growth, metastasis, and chronic inflammation. Although the relationship of FDI-6 compound with FOXM1 protein is well known in the literature, its relationship with angiogenesis is not adequately elucidated. This study investigates the relationship of FDI-6 with angiogenesis and vascular endothelial growth factor B (VEGF-B) protein expression alterations. Furthermore, the study aims to elucidate the in silico interaction of FDI-6 with the VEGFR1 protein, a key player in initiating the angiogenic process, which is activated through its binding with VEGF-B. Our results demonstrate a significant effect of FDI-6 on cell viability. Specifically, we determined that the IC50 value of FDI-6 in HUVEC cells after 24 h of treatment is 24.2 μM, and in MDA-MB-231 cells after 24 h of application, it is 10.8 μM. These findings suggest that the cytotoxic effect of FDI-6 varies depending on the cell type. In wound healing experiments, FDI-6 significantly suppressed wound closure in MDA-MB-231 cells but did not show a similar effect in HUVEC cells. This finding suggests FDI-6 may have potential cell-type-specific effects. Molecular docking studies reveal that FDI-6 exhibits a stronger interaction with the VEGFR1 protein compared to its inhibitor, a novel interaction not previously reported in the literature. Molecular dynamic simulation results demonstrate a stable interaction between FDI-6 and VEGFR1. This interaction suggests that FDI-6 might modulate mechanisms associated with angiogenesis. Our Western blot analysis results show regulatory effects of FDI-6 on the expression of the VEGF-B protein. We encourage exploration of FDI-6 as a potential therapeutic agent in pathological processes related to angiogenesis. In conclusion, this study provides a detailed examination of the relationship between FDI-6 and both the molecular interactions and protein expressions of VEGF-B. Our findings support FDI-6 as a potential therapeutic agent in pathological processes associated with angiogenesis.

Indexed as

Breast NeoplasmsVascular Endothelial Growth Factor BCell Line, TumorCell ProliferationCell SurvivalComputer SimulationFemaleGene Expression Regulation, NeoplasticHumansHuman Umbilical Vein Endothelial CellsMolecular Docking SimulationNeoplasm MetastasisNeovascularization, PathologicVascular Endothelial Growth Factor Receptor-1Vascular Endothelial Growth Factor BVascular Endothelial Growth Factor Receptor-1AngiogenesisCytotoxicityFDI-6Molecular dynamic simulationVEGF-B

Identifiers

PMID38853176
PMCPMC11909019

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.