Evidence map›Paper›PMID 38850438›Full record

ArticleInternational journal of computer assisted radiology and surgery2024

Self-supervised learning for classifying paranasal anomalies in the maxillary sinus.

Debayan Bhattacharya, Finn Behrendt, Benjamin Tobias Becker, Lennart Maack, Dirk Beyersdorff, Elina Petersen, Marvin Petersen, Bastian Cheng, Dennis Eggert, Christian Betz and 2 more

Abstract read
In one paragraph

Article in International journal of computer assisted radiology and surgery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Debayan BhattacharyaInstitute of Medical Technology and Intelligent Systems, Technische Universitaet Hamburg, Hamburg, Germany. debayan.bhattacharya@tuhh.de.ORCID http://orcid.org/0000-0001-8552-2227
Finn BehrendtInstitute of Medical Technology and Intelligent Systems, Technische Universitaet Hamburg, Hamburg, Germany.
Benjamin Tobias BeckerDepartment of Otorhinolaryngology, Head and Neck Surgery and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Lennart MaackInstitute of Medical Technology and Intelligent Systems, Technische Universitaet Hamburg, Hamburg, Germany.
Dirk BeyersdorffClinic and Polyclinic for Diagnostic and Interventional Radiology and Nuclear Medicine, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Elina PetersenPopulation Health Research Department, University Heart and Vascular Center, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Marvin PetersenClinic and Polyclinic for Neurology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Bastian ChengClinic and Polyclinic for Neurology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Dennis EggertDepartment of Otorhinolaryngology, Head and Neck Surgery and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Christian BetzDepartment of Otorhinolaryngology, Head and Neck Surgery and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Anna Sophie Hoffmann *Department of Otorhinolaryngology, Head and Neck Surgery and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Alexander Schlaefer *Institute of Medical Technology and Intelligent Systems, Technische Universitaet Hamburg, Hamburg, Germany.

Funding

Zentrales Innovationsprogramm Mittelstand, Arbeitsgemeinschaft industrieller Forschungsvereinigungen K5208101KS0
6 · The paper itself

Abstract

purposeParanasal anomalies, frequently identified in routine radiological screenings, exhibit diverse morphological characteristics. Due to the diversity of anomalies, supervised learning methods require large labelled dataset exhibiting diverse anomaly morphology. Self-supervised learning (SSL) can be used to learn representations from unlabelled data. However, there are no SSL methods designed for the downstream task of classifying paranasal anomalies in the maxillary sinus (MS).

methodsOur approach uses a 3D convolutional autoencoder (CAE) trained in an unsupervised anomaly detection (UAD) framework. Initially, we train the 3D CAE to reduce reconstruction errors when reconstructing normal maxillary sinus (MS) image. Then, this CAE is applied to an unlabelled dataset to generate coarse anomaly locations by creating residual MS images. Following this, a 3D convolutional neural network (CNN) reconstructs these residual images, which forms our SSL task. Lastly, we fine-tune the encoder part of the 3D CNN on a labelled dataset of normal and anomalous MS images.

resultsThe proposed SSL technique exhibits superior performance compared to existing generic self-supervised methods, especially in scenarios with limited annotated data. When trained on just 10% of the annotated dataset, our method achieves an area under the precision-recall curve (AUPRC) of 0.79 for the downstream classification task. This performance surpasses other methods, with BYOL attaining an AUPRC of 0.75, SimSiam at 0.74, SimCLR at 0.73 and masked autoencoding using SparK at 0.75.

conclusionA self-supervised learning approach that inherently focuses on localizing paranasal anomalies proves to be advantageous, particularly when the subsequent task involves differentiating normal from anomalous maxillary sinuses. Access our code at https://github.com/mtec-tuhh/self-supervised-paranasal-anomaly .

Indexed as

Maxillary SinusSupervised Machine LearningHumansImaging, Three-DimensionalNeural Networks, ComputerTomography, X-Ray ComputedClassificationCNNMaxillary sinusParanasal anomalySelf-supervised learning

Identifiers

PMID38850438
PMCPMC11365849

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.