Evidence map›Paper›PMID 38849962›Full record

ArticleVeterinary research2024

In vitro phenotypic characterisation of two genotype I African swine fever viruses with genomic deletion isolated from Sardinian wild boars.

Giulia Franzoni, Mariangela S Fiori, Lorena Mura, Tania Carta, Antonello Di Nardo, Matteo Floris, Luca Ferretti, Susanna Zinellu, Pier Paolo Angioi, Anna Maria Sechi and 8 more

Abstract read
In one paragraph

Article in Veterinary research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Giulia Franzoni *Istituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy. giulia.franzoni@izs-sardegna.it.ORCID http://orcid.org/0000-0003-0987-3863
Mariangela S Fiori *Istituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Lorena Mura *Istituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Tania Carta *Istituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Antonello Di NardoThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, GU24 0NF, UK.
Matteo FlorisDepartment of Biomedical Sciences, University of Sassari, 07100, Sassari, Italy.
Luca FerrettiPandemic Sciences Institute and Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX1 4BH, UK.
Susanna ZinelluIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Pier Paolo AngioiIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Anna Maria SechiIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Francesca CarusilloIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Diego BrunduIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Manlio FaddaDepartment of Veterinary Medicine, University of Sassari, 07100, Sassari, Italy.
Riccardo BazzardiIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Monica GiammarioliNational Swine Fever Laboratory, Istituto Zooprofilattico Sperimentale Dell'Umbria e Delle Marche, 06126, Perugia, Italy.
Stefano CappaiIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Silvia Dei GiudiciIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.
Annalisa OggianoIstituto Zooprofilattico Sperimentale Della Sardegna, 07100, Sassari, Italy.

Funding

Ministero della Salute IZS SA 06/21 RC
6 · The paper itself

Abstract

African swine fever virus (ASFV) causes a devastating disease affecting domestic and wild pigs. ASF was first introduced in Sardinia in 1978 and until 2019 only genotype I isolates were identified. A remarkable genetic stability of Sardinian ASFV isolates was described, nevertheless in 2019 two wild boar isolates with a sustained genomic deletion (4342 base pairs) were identified (7303WB/19, 7212WB/19). In this study, we therefore performed in vitro experiments with monocyte-derived macrophages (moMФ) to unravel the phenotypic characteristics of these deleted viruses. Both 7303WB/19 and 7212WB/19 presented a lower growth kinetic in moMФ compared to virulent Sardinian 26544/OG10, using either a high (1) or a low (0.01) multiplicity of infection (MOI). In addition, flow cytometric analysis showed that both 7303WB/19 and 7212WB/19 presented lower intracellular levels of both early and late ASFV proteins. We subsequently investigated whether deleted virus variants were previously circulating in wild boars in Sardinia. In the four years preceding the last genotype I isolation (February 2015-January 2019), other eight wild boar isolates were collected, all belonging to p72 genotype I, B602L subgroup X, but none of them presented a sustained genomic deletion. Overall, we observed the deleted virus isolates in Sardinia only in 2019, at the end of a strong eradication campaign, and our data suggest that it might possess an attenuated phenotype in vivo. A better understanding of ASFV evolution in endemic territories might contribute to development of effective control measures against ASF.

Indexed as

African Swine FeverAfrican Swine Fever VirusGenotypeSus scrofaAnimalsGenome, ViralItalyMacrophagesPhenotypeSequence DeletionSwineAfrican swine fever viruscytokinesgenomic deletionmacrophagessequencingwild boar

Identifiers

PMID38849962
PMCPMC11157848

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.