Evidence map›Paper›PMID 38848579›Full record

ReviewAnnual review of microbiology2024

Cyanobacteriochromes: A Rainbow of Photoreceptors.

Nathan C Rockwell, J Clark Lagarias

Abstract readReview
In one paragraph

Review in Annual review of microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Genomic analysis highlights a novel class of DPCF-type cyanobacteriochrome.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Cyanobacteria Under UV Radiation: General Insights into Stress Responses.International journal of molecular sciences · 2025
    Review
  8. Circular dichroism spectroscopy reveals multiple phytochrome photoproducts in equilibrium.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2025
    Article
  9. Red-light signaling pathway activates desert cyanobacteria to prepare for desiccation tolerance.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Nathan C RockwellDepartment of Molecular and Cellular Biology, University of California, Davis, California, USA; email: ncrockwell@ucdavis.edu, jclagarias@ucdavis.edu.
J Clark LagariasDepartment of Molecular and Cellular Biology, University of California, Davis, California, USA; email: ncrockwell@ucdavis.edu, jclagarias@ucdavis.edu.

Funding

UNDERSTANDING AND LEVERAGING MOLECULAR DIVERSITY WITHIN THE PHYTOCHROME SUPERFAMILYR35GM139598 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LAGARIAS, JOHN CLARK · 2021 to 2025
$2.0M
NIGMS NIH HHS R35 GM139598
6 · The paper itself

Abstract

Widespread phytochrome photoreceptors use photoisomerization of linear tetrapyrrole (bilin) chromophores to measure the ratio of red to far-red light. Cyanobacteria also contain distantly related cyanobacteriochrome (CBCR) proteins that share the bilin-binding GAF domain of phytochromes but sense other colors of light. CBCR photocycles are extremely diverse, ranging from the near-UV to the near-IR. Photoisomerization of the bilin triggers photoconversion of the CBCR input, thereby modulating the biochemical signaling state of output domains such as histidine kinase bidomains that can interface with cellular signal transduction pathways. CBCRs thus can regulate several aspects of cyanobacterial photobiology, including phototaxis, metabolism of cyclic nucleotide second messengers, and optimization of the cyanobacterial light-harvesting apparatus. This review examines spectral tuning, photoconversion, and photobiology of CBCRs and recent developments in understanding their evolution and in applying them in synthetic biology.

Indexed as

Bacterial ProteinsCyanobacteriaPhotoreceptors, MicrobialBile PigmentsLightPhytochromeSignal TransductionBacterial ProteinsBile PigmentsPhotoreceptors, MicrobialPhytochromecyanobacterialight harvestingoptogeneticsphototaxissecond messengertetrapyrrole

Identifiers

PMID38848579
PMCPMC11578781

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.