Evidence map›Paper›PMID 38847537›Full record

ArticleMicrobiology resource announcements2024

Setu: a pipeline for the robust assembly of SARS-CoV-2 genomes.

Nityendra Shukla, Neha Srivastava, Prachi Srivastava, Jitendra Narayan

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nityendra ShuklaCSIR-Institute of Genomics & Integrative Biology, New Delhi, Delhi, India.
Neha SrivastavaInstitute of Biotechnology, Amity University, Lucknow, India.
Prachi SrivastavaInstitute of Biotechnology, Amity University, Lucknow, India.ORCID 0000-0003-4138-5464
Jitendra NarayanCSIR-Institute of Genomics & Integrative Biology, New Delhi, Delhi, India.ORCID 0000-0002-2065-2861

Funding

Rockefeller Foundation (RF) 2021 HTH 018
6 · The paper itself

Abstract

Setu is an efficient pipeline integrating currently available open source bioinformatic tools to perform rapid

Indexed as

COVID-19genome assemblygenome surveillanceSARS-CoV-2viral evolution

Identifiers

PMID38847537
PMCPMC11256813

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.