Evidence map›Paper›PMID 38844661›Full record

ArticleMedical & biological engineering & computing2024

Automatic text classification of prostate cancer malignancy scores in radiology reports using NLP models.

Jaime Collado-Montañez, Pilar López-Úbeda, Mariia Chizhikova, M Carlos Díaz-Galiano, L Alfonso Ureña-López, Teodoro Martín-Noguerol, Antonio Luna, M Teresa Martín-Valdivia

Abstract read
In one paragraph

Article in Medical & biological engineering & computing, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jaime Collado-Montañez *Department of Computer Science, Advanced Studies Center in ICT (CEATIC), Universidad de Jaén, Campus Las Lagunillas, Jaén, 23071, Spain. jcollado@ujaen.es.ORCID http://orcid.org/0000-0002-9672-6740
Pilar López-Úbeda *Natural Language Processing Unit, HT Médica, Carmelo Torres, no̱2, Jaén, 23007, Spain.
Mariia Chizhikova *Department of Computer Science, Advanced Studies Center in ICT (CEATIC), Universidad de Jaén, Campus Las Lagunillas, Jaén, 23071, Spain.
M Carlos Díaz-GalianoDepartment of Computer Science, Advanced Studies Center in ICT (CEATIC), Universidad de Jaén, Campus Las Lagunillas, Jaén, 23071, Spain.
L Alfonso Ureña-LópezDepartment of Computer Science, Advanced Studies Center in ICT (CEATIC), Universidad de Jaén, Campus Las Lagunillas, Jaén, 23071, Spain.
Teodoro Martín-NoguerolMRI Unit, Radiology Department, HT Médica, Carmelo Torres, no̱2, Jaén, 23007, Spain.
Antonio LunaMRI Unit, Radiology Department, HT Médica, Carmelo Torres, no̱2, Jaén, 23007, Spain.
M Teresa Martín-ValdiviaDepartment of Computer Science, Advanced Studies Center in ICT (CEATIC), Universidad de Jaén, Campus Las Lagunillas, Jaén, 23071, Spain.

Funding

NEW MODEL OF DRUG ABUSE WITH DEPRESSION COMORBIDITYR03DA012120 · NIDA · UNIVERSITY OF GEORGIA (UGA) · PI HOLMES, PHILIP V · 1999 to 2000
$58k
Agencia Estatal de Investigación PID2021-122263OB-C21Ministerio de Ciencia e Innovación PDC2022-133146-C21Ministerio de Ciencia e Innovación TED2021-130145B-I00Ministerio de Sanidad, Consumo y Bienestar Social PTQ2021-012120Ministerio de Sanidad, Consumo y Bienestar Social SUBV00016
6 · The paper itself

Abstract

This paper presents the implementation of two automated text classification systems for prostate cancer findings based on the PI-RADS criteria. Specifically, a traditional machine learning model using XGBoost and a language model-based approach using RoBERTa were employed. The study focused on Spanish-language radiological MRI prostate reports, which has not been explored before. The results demonstrate that the RoBERTa model outperforms the XGBoost model, although both achieve promising results. Furthermore, the best-performing system was integrated into the radiological company's information systems as an API, operating in a real-world environment.

Indexed as

Machine LearningMagnetic Resonance ImagingNatural Language ProcessingProstatic NeoplasmsAlgorithmsHumansMaleNatural language processingPI-RADS classificationRadiology report classificationRoBERTa-clinicalXGBoost

Identifiers

PMID38844661
PMCPMC11485118

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.